PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.02G071500.3.p
Common NameGLYMA_02G071500
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family GATA
Protein Properties Length: 281aa    MW: 31322.2 Da    PI: 8.1138
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.02G071500.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.92.5e-17205239135
                 GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                          C++C +  Tp+WR gp g+ktLCnaCG+++++ +l
  Glyma.02G071500.3.p 205 CTHCLAQRTPQWRAGPLGPKTLCNACGVRFKSGRL 239
                          *******************************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004016.0E-15199253IPR000679Zinc finger, GATA-type
SuperFamilySSF577162.14E-14201263No hitNo description
Gene3DG3DSA:3.30.50.101.8E-13203237IPR013088Zinc finger, NHR/GATA-type
PROSITE profilePS5011410.95203235IPR000679Zinc finger, GATA-type
CDDcd002024.28E-11204251No hitNo description
PROSITE patternPS003440205230IPR000679Zinc finger, GATA-type
PfamPF003205.6E-15205239IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
MDVCRNVSVS SSECQQELPT LDDLFSHQNT EVDFGLEWLS VFVEDCFSSR PSCLLAPGGV  60
QTTSTSTSTK PSSGTILQRP QQLSHHCPLQ NFAVPGKARS KRKRKRLSAP RTTKHTLSTW  120
SQHFSTQNDG VSSDPPLLKQ AYWLADSELI VPKKKDVEQE EEEGVVVVVK KEKLGDYCDH  180
DEGDEINNNN SNNDDNVQHP IPRRCTHCLA QRTPQWRAGP LGPKTLCNAC GVRFKSGRLL  240
PEYRPAKSPT FVSYLHSNSH KKVMEMRMGV VGVFSTDNNK *
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.224760.0flower
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.02G071500.3.p
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0892500.0BT089250.1 Soybean clone JCVI-FLGm-1B13 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003518214.10.0GATA transcription factor 2 isoform X2
RefseqXP_028198986.10.0GATA transcription factor 2-like isoform X2
TrEMBLA0A0R0L3S50.0A0A0R0L3S5_SOYBN; Uncharacterized protein
TrEMBLA0A445LKK20.0A0A445LKK2_GLYSO; GATA transcription factor 9
TrEMBLI1JD480.0I1JD48_SOYBN; Uncharacterized protein
STRINGGLYMA02G07850.10.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45050.13e-34GATA transcription factor 2