PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.02G071500.1.p
Common NameGLYMA_02G071500
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family GATA
Protein Properties Length: 292aa    MW: 32653.9 Da    PI: 7.9324
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.02G071500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.82.6e-17216250135
                 GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                          C++C +  Tp+WR gp g+ktLCnaCG+++++ +l
  Glyma.02G071500.1.p 216 CTHCLAQRTPQWRAGPLGPKTLCNACGVRFKSGRL 250
                          *******************************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004016.0E-15210264IPR000679Zinc finger, GATA-type
SuperFamilySSF577162.28E-14212274No hitNo description
Gene3DG3DSA:3.30.50.101.9E-13214248IPR013088Zinc finger, NHR/GATA-type
PROSITE profilePS5011410.95214246IPR000679Zinc finger, GATA-type
CDDcd002022.59E-11215262No hitNo description
PROSITE patternPS003440216241IPR000679Zinc finger, GATA-type
PfamPF003205.9E-15216250IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    Send to blast
MLWSFILLLV DMDVCRNVSV SSSECQQELP TLDDLFSHQN TEVDFGLEWL SVFVEDCFSS  60
RPSCLLAPGG VQTTSTSTST KPSSGTILQR PQQLSHHCPL QNFAVPGKAR SKRKRKRLSA  120
PRTTKHTLST WSQHFSTQND GVSSDPPLLK QAYWLADSEL IVPKKKDVEQ EEEEGVVVVV  180
KKEKLGDYCD HDEGDEINNN NSNNDDNVQH PIPRRCTHCL AQRTPQWRAG PLGPKTLCNA  240
CGVRFKSGRL LPEYRPAKSP TFVSYLHSNS HKKVMEMRMG VVGVFSTDNN K*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.224760.0flower
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.02G071500.1.p
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0892500.0BT089250.1 Soybean clone JCVI-FLGm-1B13 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003518214.10.0GATA transcription factor 2 isoform X2
RefseqXP_028198986.10.0GATA transcription factor 2-like isoform X2
TrEMBLA0A0R0L3S50.0A0A0R0L3S5_SOYBN; Uncharacterized protein
STRINGGLYMA02G07850.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF84872444
Representative plantOGRP6817287
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45050.13e-34GATA transcription factor 2