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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Glyma.02G012000.1.p |
| Common Name | GLYMA_02G012000 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
GRAS |
| Protein Properties |
Length: 467aa MW: 52769.8 Da PI: 6.8174 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.02G012000.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 209.9 | 1.4e-64 | 108 | 464 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl....fsev 87
+ Ll++Ae v +++e+a+ lL+ + +s+ + ++qR++++f++AL +r+ r++ + + +++++ e+++ e+l +++ ++
Glyma.02G012000.1.p 108 AQFLLAAAERVGCQQFERASILLSSHFQWNSSGDGAVQRVVFHFAQALLERIRRETGGKVTLNKCEKNCEREMFEKLRSDTNmavtCHQK 197
6789**************************************************777777666777777777666665554434448899 PP
GRAS 88 sPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpf 176
P+ + ++ qaI+e v ++++vH i fdi+ G+Q aL+qaLa+R+ ++ l++T++g + k+eleetg+ L f +++
Glyma.02G012000.1.p 198 IPFNQEMQFSGVQAIVENVTSKTKVHLINFDIGCGVQCTALMQALAERQeKQVELLKVTAIGL---QGKTELEETGKGLVVFVTSI---- 280
9************************************************455569********...589**********8776554.... PP
GRAS 177 efnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysa 266
++++e++ ++ +Ea+aV + ++l +++++s sle+ +++++++++P ++vv e ea hns+s ++rf+eal +y+a
Glyma.02G012000.1.p 281 ----------IEIKVEQFGIEDNEAVAVYSPYMLRTMVSDSDSLEH----LMRVMRKIRPSIMVVLEVEAMHNSPSCVNRFIEALFFYAA 356
..........367889**********************99999998....**************************************** PP
GRAS 267 lfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveees 355
+fd++ + + +++e ri +E l++ i+n+va+e er+ r+ + Wr+ + + + + ++se+ qa+l+ +k++ ++ +v+ +
Glyma.02G012000.1.p 357 FFDCIGTCMKQDHECRIRIEGI-LSEGIRNIVAMEDGERKVRNVKIDVWRRFFARYRMVETTFSESSLYQANLVAKKFAcGNFCTVDRNG 445
********************99.********************************************************88888999999 PP
GRAS 356 gslvlgWkdrpLvsvSaWr 374
++l+ gWk+ p+ s+S+W+
Glyma.02G012000.1.p 446 KCLIVGWKGTPIHSISVWK 464
9*****************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 467 aa
Download sequence Send
to blast |
MIEEFNFEPI QQPKQPLQET KEPKKNKQVL PSSLASLELL SNYGSSDSSV QTCVGPQKLS 60
TEEIMRLAGA RYIQHSTQLC DDVCIPVHPY GFGLGVLSQE ENRDIELAQF LLAAAERVGC 120
QQFERASILL SSHFQWNSSG DGAVQRVVFH FAQALLERIR RETGGKVTLN KCEKNCEREM 180
FEKLRSDTNM AVTCHQKIPF NQEMQFSGVQ AIVENVTSKT KVHLINFDIG CGVQCTALMQ 240
ALAERQEKQV ELLKVTAIGL QGKTELEETG KGLVVFVTSI IEIKVEQFGI EDNEAVAVYS 300
PYMLRTMVSD SDSLEHLMRV MRKIRPSIMV VLEVEAMHNS PSCVNRFIEA LFFYAAFFDC 360
IGTCMKQDHE CRIRIEGILS EGIRNIVAME DGERKVRNVK IDVWRRFFAR YRMVETTFSE 420
SSLYQANLVA KKFACGNFCT VDRNGKCLIV GWKGTPIHSI SVWKFL*
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