PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.02G000800.1.p
Common NameGLYMA_02G000800, LOC100815874
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 265aa    MW: 30286.2 Da    PI: 7.9891
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.02G000800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.12.1e-05101146555
                          HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          h ++Er RR+r +++   L ++lP+      +K +  ++ ++A + I  Lq
  Glyma.02G000800.1.p 101 HMINERMRRQRQRQCCLALHSILPQG-----TKTDNNSVIQMAAKEIVRLQ 146
                          7899********************97.....79999999999998887776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.14E-1093161IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.56396145IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.9E-6101163IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    Send to blast
MDRFFPEKIL GEIFWDEPFL ATDQSDLVQY SQINKAEASP PAATPSAFVQ YRDLPRRINS  60
LNGSNSQIMS KKMLAFLRKS WPWPVERNNV QENERNRSFR HMINERMRRQ RQRQCCLALH  120
SILPQGTKTD NNSVIQMAAK EIVRLQGCRE ELQRKNVELE ANLEGVESSK GSGSKVQYLR  180
VPHPKSGIDS MVEILKCLKD KGVDTRSIKS TFSPQELFAV LETETDEVAD ADVESATWGT  240
HDELDWKLHS DAREGSNKKQ KTIH*
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.02G000800.1.p
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0963470.0BT096347.1 Soybean clone JCVI-FLGm-9N23 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006574490.10.0transcription factor bHLH92
RefseqXP_028191547.10.0transcription factor bHLH92
TrEMBLA0A445LHM40.0A0A445LHM4_GLYSO; Transcription factor bHLH92 isoform A (Fragment)
STRINGGLYMA02G00290.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF125722734
Representative plantOGRP97631112
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43650.11e-22bHLH family protein