PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Glyma.01G163500.1.p | ||||||||
Common Name | GLYMA_01G163500 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | bZIP | ||||||||
Protein Properties | Length: 181aa MW: 20189.7 Da PI: 8.7531 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 29.8 | 1.3e-09 | 114 | 162 | 4 | 56 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 ++r +r++kNRe+A rsR a++ eLe +v+ L++eN +Lk + ++l + + Glyma.01G163500.1.p 114 DRRNKRMIKNRESAARSR----AYTNELELEVEHLKEENARLKRQQQQLYEAA 162 689**************9....7********************9999987765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.9E-5 | 111 | 168 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 3.5E-10 | 114 | 160 | No hit | No description |
CDD | cd14707 | 1.56E-21 | 115 | 162 | No hit | No description |
SuperFamily | SSF57959 | 4.1E-7 | 115 | 160 | No hit | No description |
Pfam | PF00170 | 1.2E-7 | 115 | 161 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009911 | Biological Process | positive regulation of flower development | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:2000028 | Biological Process | regulation of photoperiodism, flowering | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
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Protein Sequence Length: 181 aa Download sequence Send to blast |
MEEVWKDINL ATLNEQSTIS TRPNVEGVMF QDFLARPFTT IDPPNTTLLS SASSETAANS 60 LFSPASPGPP LVTLSLSSLP HHHHFRFEHP SSIPPPPSNK RFAQPADHCS TIGDRRNKRM 120 IKNRESAARS RAYTNELELE VEHLKEENAR LKRQQQQLYE AAVSEQKKKG TLCRASTAPF 180 * |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | TISSUE SPECIFICITY: Highly expressed in shoot apex. {ECO:0000269|PubMed:16099979, ECO:0000269|PubMed:16099980, ECO:0000269|PubMed:25661797}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor required for the transition to flowering promoted by FT. {ECO:0000269|PubMed:16099979, ECO:0000269|PubMed:16099980}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Glyma.01G163500.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006573542.1 | 1e-121 | protein FD | ||||
Swissprot | Q84JK2 | 1e-32 | FD_ARATH; Protein FD | ||||
TrEMBL | A0A0R0LBJ6 | 1e-130 | A0A0R0LBJ6_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA01G36810.1 | 2e-84 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3755 | 32 | 52 | Representative plant | OGRP8739 | 6 | 10 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17770.2 | 7e-19 | basic region/leucine zipper motif 27 |
Link Out ? help Back to Top | |
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Phytozome | Glyma.01G163500.1.p |