PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.01G084200.1.p
Common NameGLYMA_01G084200, LOC100777181
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 487aa    MW: 54309.3 Da    PI: 7.7994
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.01G084200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.42.1e-10202239542
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeN 42 
                          k  rr+++NReAAr+sR+RKka++++Le    +L +  
  Glyma.01G084200.1.p 202 KTLRRLAQNREAARKSRLRKKAYVQQLESSRVKLVQLE 239
                          788*************************8655555444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.1E-7191244No hitNo description
SMARTSM003382.2E-8198267IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.22200244IPR004827Basic-leucine zipper domain
PfamPF001703.7E-7202240IPR004827Basic-leucine zipper domain
CDDcd147081.05E-23202254No hitNo description
SuperFamilySSF579599.38E-7202245No hitNo description
PROSITE patternPS000360205220IPR004827Basic-leucine zipper domain
PfamPF141441.0E-28285359IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 487 aa     Download sequence    Send to blast
MPFSSQRHSR IFLPSHTSLF LFSLMKNMQG FKTAQPSSQQ LYCHSSFLLR GNDPNQNPAR  60
FSDLGEHHHF SAVFHQEDAA DLSSSSMFSV KSSNVVGGSN MQYGTLNTNV GHAEIGSSGG  120
GCMDTRQQLM YHKGVTMAAL PLGNGQVENW ADSGKADNSQ QTDDTSTDID TDDIIPCNRV  180
KNGTRMVVHS KDETKVKPGD QKTLRRLAQN REAARKSRLR KKAYVQQLES SRVKLVQLEQ  240
ELQRARQQGI FIATPGDQGH LAVGNGALAF DIDYAHWVDE HQRLLNDLRT AVNSQMSDSD  300
LHILVDSVMA HYNELFRLKS LGTKADVLHI HNGMWKTPVE RCFMWLGGFR SSELLKIIKN  360
HLEPLTDQQL MGIYNLQQSS QQAEDALSQG LEALQQSLVE TLSSISLGPT DSGNVVDYMG  420
QMALAMGKLA DLESFVRQAD LLKQQTLQQL QRILTTRQTA RALLVQTDYI SRLRALSSLW  480
LARPRE*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.01G084200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014629584.10.0transcription factor TGA2.2 isoform X1
RefseqXP_028233780.10.0transcription factor TGA2.2-like isoform X1
SwissprotQ6IVC21e-162TGAL1_ORYSJ; Transcription factor TGAL1
TrEMBLA0A0R0LE000.0A0A0R0LE00_SOYBN; Uncharacterized protein
STRINGGLYMA01G21120.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF60223149
Representative plantOGRP7221667
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68640.11e-123bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]