PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Gh_D12G1614 | ||||||||
Common Name | WRKY67 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | WRKY | ||||||||
Protein Properties | Length: 309aa MW: 33374.9 Da PI: 6.5087 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 104.3 | 6.7e-33 | 167 | 224 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s+fprsYYrCt ++C+vkk+vers+edp +v++tYeg+H h+ Gh_D12G1614 167 EDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSEDPAIVITTYEGQHCHH 224 8******************************************************996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.2E-33 | 151 | 224 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 4.58E-28 | 158 | 224 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 29.585 | 161 | 226 | IPR003657 | WRKY domain |
SMART | SM00774 | 3.1E-38 | 166 | 225 | IPR003657 | WRKY domain |
Pfam | PF03106 | 8.7E-26 | 167 | 224 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 309 aa Download sequence Send to blast |
MEDKEGGKPG TAFTSESSWT FSGGGPDSVS SSVNYFFDKD SSILSEFGWD LQPDHADDFG 60 RFAEIDRTDS ARPELAGNLS ASQSCAAADI VVRCSVSGTA LNPGGSADVS TSNPSVSSSS 120 SEDLPEKSTG SGGKPPEIPS KVRKKGQKQI RQPRFAFMTK SEVDHLEDGY RWRKYGQKAV 180 KNSPFPRSYY RCTNSKCTVK KRVERSSEDP AIVITTYEGQ HCHHGIAFPR GGLICHEAAF 240 AGQLTPPVSQ IYHPGVQSHR QMPPSITQSQ PHQAPVDVGE PHPEPEPTSQ LPTDEGLLGD 300 IVPPGMRGR |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wj2_A | 2e-25 | 156 | 223 | 7 | 74 | Probable WRKY transcription factor 4 |
2lex_A | 2e-25 | 156 | 223 | 7 | 74 | Probable WRKY transcription factor 4 |
Search in ModeBase |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Ghi.6779 | 1e-168 | leaf| stem |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | E-value | ||||
GEO | 31072923 | 1e-168 |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KF669844 | 0.0 | KF669844.1 Gossypium hirsutum WRKY transcription factor 67 (WRKY67) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016736178.1 | 0.0 | PREDICTED: probable WRKY transcription factor 57 | ||||
Swissprot | Q9C983 | 2e-73 | WRK57_ARATH; Probable WRKY transcription factor 57 | ||||
TrEMBL | A0A1U8NDX7 | 0.0 | A0A1U8NDX7_GOSHI; probable WRKY transcription factor 57 | ||||
STRING | Gorai.008G178100.1 | 0.0 | (Gossypium raimondii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM4995 | 27 | 53 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69310.2 | 7e-67 | WRKY DNA-binding protein 57 |
Publications ? help Back to Top | |||
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