PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Gh_D12G0737

Organism

Gossypium hirsutum

Taxonomic ID

3635

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium

Family

bZIP

Protein Properties

Length: 179aa MW: 20844.7 Da PI: 11.2507

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Gh_D12G0737	genome	NAU-NBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.2	4.9e-10	70	127	5	62
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 ++ rr+++NRe+ArrsR RK+ +e+L++ + L eN++L ++l l ++ +++++ Gh_D12G0737 70 RKRRRMISNRESARRSRMRKRNHLENLRNQANRLRIENRELTNRLRFLLYHCHRVRTD 127 5789**************************************9998887777776655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.6E-11	66	130	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.795	68	131	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.8E-8	68	124	No hit	No description
SuperFamily	SSF57959	9.64E-10	70	120	No hit	No description
Pfam	PF00170	1.8E-7	70	125	IPR004827	Basic-leucine zipper domain
CDD	cd14702	8.29E-17	71	122	No hit	No description
PROSITE pattern	PS00036	0	73	88	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 179 aa Download sequence Send to blast
MLSTVPAIIS SNPMIQSDPF PSLQSAWDCS QLFSNTQSVG PAPIEPNQTQ AHSNSGLDES 60 NQTLSIIDER KRRRMISNRE SARRSRMRKR NHLENLRNQA NRLRIENREL TNRLRFLLYH 120 CHRVRTDNDR LRSESTVLRQ KLSDMHQILL FKQLQQFSSA WPCNNVTVMS EQIPPPLII

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	69	73	RKRRR

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016730231.1	1e-128	PREDICTED: basic leucine zipper 43-like
TrEMBL	A0A1U8MTR5	1e-127	A0A1U8MTR5_GOSHI; basic leucine zipper 43-like
TrEMBL	A0A2P5QFZ7	1e-127	A0A2P5QFZ7_GOSBA; Uncharacterized protein
STRING	Gorai.008G085300.1	1e-121	(Gossypium raimondii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM3338	26	65

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49760.1	8e-27	basic leucine-zipper 5