PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_D08G1474
Common NameWRKY26
Organism
Gossypium hirsutum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family WRKY
Protein Properties Length: 325aa    MW: 35568.2 Da    PI: 6.9894
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_D08G1474genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.68.4e-31145203259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  +D ++WrKYGqK++kgs++pr+YYrC+s+ gC ++k+ver ++dp+++++tY+ eHnh+
  Gh_D08G1474 145 SDVWAWRKYGQKPIKGSPYPRGYYRCSSSkGCLARKQVERHRSDPNMFIVTYTAEHNHP 203
                  79*************************998****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081134.578139205IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.3E-30140205IPR003657WRKY domain
SuperFamilySSF1182901.96E-26141205IPR003657WRKY domain
SMARTSM007742.1E-37144204IPR003657WRKY domain
PfamPF031069.7E-26146203IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    Send to blast
MDVDWDLHAV VRGCATVTTT TTSSGGGCGG VAANSSLMAD FYPQSRFSSF GSQEEPFQGQ  60
FSCFPNQFEA KNAMEELHEL YKPFFPKSQP QRKQQQEHQQ VKPKLSQVGS VTTASSSTST  120
NNSRSKRRKN QLKRVCHVPP EGLSSDVWAW RKYGQKPIKG SPYPRGYYRC SSSKGCLARK  180
QVERHRSDPN MFIVTYTAEH NHPAPTHRNS LAGSTRQKPF TPQTVTAGDS VKPSSSKPAD  240
SLSPTTSVDE GVVVQSTKVH SREDLVEDEG EDEFGMSDTA VSDDFFEGLE GLAEIVTGNC  300
FPENFPASFD FSWTANNAAT AAGGI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B8e-22129206280Disease resistance protein RRS1
5w3x_D8e-22129206280Disease resistance protein RRS1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ghi.103320.0leaf| ovule| stem
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor involved in the expression of defense genes in innate immune response of plants. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Activates WRKY 29, SIRK and its own promoters. {ECO:0000269|PubMed:11875555}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced after flagellin treatment. {ECO:0000269|PubMed:11875555}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ8258680.0KJ825868.1 Gossypium hirsutum WRKY protein 26 (WRKY26) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012475240.10.0PREDICTED: WRKY transcription factor 22-like
SwissprotO046099e-93WRK22_ARATH; WRKY transcription factor 22
TrEMBLA0A0U1ZAQ00.0A0A0U1ZAQ0_GOSHI; WRKY protein 26
STRINGGorai.004G160100.10.0(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM78102741
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.11e-72WRKY family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Coego A, et al.
    The TRANSPLANTA collection of Arabidopsis lines: a resource for functional analysis of transcription factors based on their conditional overexpression.
    Plant J., 2014. 77(6): p. 944-53
    [PMID:24456507]
  3. Gkizi D, et al.
    The Innate Immune Signaling System as a Regulator of Disease Resistance and Induced Systemic Resistance Activity Against Verticillium dahliae.
    Mol. Plant Microbe Interact., 2016. 29(4): p. 313-23
    [PMID:26780421]
  4. Kloth KJ, et al.
    AtWRKY22 promotes susceptibility to aphids and modulates salicylic acid and jasmonic acid signalling.
    J. Exp. Bot., 2016. 67(11): p. 3383-96
    [PMID:27107291]
  5. Camborde L, et al.
    Detection of nucleic acid-protein interactions in plant leaves using fluorescence lifetime imaging microscopy.
    Nat Protoc, 2017. 12(9): p. 1933-1950
    [PMID:28837131]
  6. Wang S, et al.
    Bacillus cereus AR156 Activates Defense Responses to Pseudomonas syringae pv. tomato in Arabidopsis thaliana Similarly to flg22.
    Mol. Plant Microbe Interact., 2018. 31(3): p. 311-322
    [PMID:29090631]