PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Gh_D07G1114 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | bZIP | ||||||||
Protein Properties | Length: 196aa MW: 22271.6 Da PI: 9.2284 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.1 | 2.5e-10 | 16 | 56 | 5 | 45 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k rr+++NReAAr+sR+RKk ++++Le L++ ++L Gh_D07G1114 16 KTLRRLAQNREAARKSRLRKKPYVQQLESSQLRLTELEQEL 56 788*************************9766666655544 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 4.6E-8 | 9 | 59 | No hit | No description |
SMART | SM00338 | 1.7E-7 | 12 | 83 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF07716 | 4.4E-7 | 14 | 58 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.22 | 14 | 58 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.31E-7 | 16 | 59 | No hit | No description |
CDD | cd14708 | 4.01E-22 | 16 | 68 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 19 | 34 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 1.1E-26 | 101 | 174 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 196 aa Download sequence Send to blast |
MVNMVDQPKS KSGDQKTLRR LAQNREAARK SRLRKKPYVQ QLESSQLRLT ELEQELQRAR 60 QQGIFIASGL SGDHGHTVAG NAALAFDMEY GRWLDEHQQL INDLRSTVNS HMGDNELCIL 120 VGGVMAHYDK VFKLKSIGAK VDVFHMLSGM WKTPAERCFM WLGGFRSFEL MKILGNHLEP 180 LTDQQLISIC NLQQSS |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Ghi.25255 | 1e-130 | boll| ovule |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | DEVELOPMENTAL STAGE: Expressed in the apical meristem, the floral meristem, each whorl of organ primordia, and in ovule primordia during wild-type flower development. {ECO:0000269|PubMed:9990857}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator involved in the determination of floral organ number. Acts to determine floral organ patterning by establishing floral organ primordia in specific numbers and positions. Plays a role in regulating stem cell fate by directly controlling AG expression. Binds to the 5'-AAGAAT-3' cis-acting element found in AG promoter. Might represent a target for a post-translational modification by GRXC7/ROXY1. {ECO:0000269|PubMed:19395638, ECO:0000269|PubMed:19395639, ECO:0000269|PubMed:9990857}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016703671.1 | 1e-134 | PREDICTED: transcription factor HBP-1b(c38)-like isoform X2 | ||||
Swissprot | Q9SX27 | 1e-99 | PAN_ARATH; Transcription factor PERIANTHIA | ||||
TrEMBL | A0A1U8KMF9 | 1e-132 | A0A1U8KMF9_GOSHI; transcription factor HBP-1b(C38)-like isoform X2 | ||||
STRING | Gorai.008G185000.1 | 1e-131 | (Gossypium raimondii) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68640.1 | 2e-86 | bZIP family protein |