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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Gh_D07G0779 |
Common Name | GAI |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
GRAS |
Protein Properties |
Length: 548aa MW: 59982 Da PI: 4.7972 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Gh_D07G0779 | genome | NAU-NBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 457.9 | 6.2e-140 | 171 | 533 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98
lv++L++cAeav++++l+la+al++++ las++ +m+++a+yf+eALa+r++r ++pp + ++ + ++ + f+e++P+lkf+h+ta
Gh_D07G0779 171 LVHTLMACAEAVQQDNLKLADALVKHIGLLASSQTGAMRKVATYFAEALARRIYR-------IFPPDSLDP-SYNDK--LQIPFYETCPYLKFAHFTA 258
689***************************************************9.......566666653.23333..3335*************** PP
GRAS 99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
NqaIlea++ ++rvH+iDf+++qG+QWpaL+qaLa Rp+gpp +R+Tg+g+p+++++++l+++g++La++Ae++g++fef+ +va++l+dle+e+L++
Gh_D07G0779 259 NQAILEAFSMASRVHVIDFGLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLAERIGIEFEFRGFVANSLADLEPEMLDI 356
************************************************************************************************** PP
GRAS 197 kp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgr 292
+p E++aVn v++lh ll++++ +e+ v++ +k ++Pk+v+vveqea+hn++ Fl+rf+eal+yys+lfdsle + + ++++ +++ +lgr
Gh_D07G0779 357 RPpeIEVVAVNAVFELHPLLARPGGIEK----VVSSIKAMKPKIVTVVEQEANHNGPVFLDRFTEALHYYSTLFDSLEGSGVAPASQDLAMSELYLGR 450
**9899*********************9....*********************************************888778888999999999*** PP
GRAS 293 eivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
+i+nvvaceg +r+erhe l +Wr r+e+aGF+pv+l+++a+kqa++ll+ ++ +dgyrvee++g+l+lgW++rpL+++SaWr
Gh_D07G0779 451 QICNVVACEGMDRVERHEPLTQWRTRMETAGFSPVHLGSNAYKQASMLLALFAsGDGYRVEENNGCLMLGWHTRPLIATSAWR 533
**********************************************************************************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009740 | Biological Process | gibberellic acid mediated signaling pathway |
GO:0090378 | Biological Process | seed trichome elongation |
GO:2000273 | Biological Process | positive regulation of receptor activity |
GO:0005634 | Cellular Component | nucleus |
Sequence ? help Back to Top |
Protein Sequence Length: 548 aa
Download sequence Send
to blast |
MKRDHQEISG SGSKPAESSS IKGKLWEEDP DAGGMDDELL AVLGYKVRSS DMADVAQKLE 60 MLEKVMGTAQ EDGISQLGDT VHFNPSDLSG WVQNLLIEFN GPTTTPDPNF NDDSEYDLRA 120 IPGVAAYPPV KSDPGLENTR KRAKTESSSS SSSTTTRPVV LIDSQEAGVR LVHTLMACAE 180 AVQQDNLKLA DALVKHIGLL ASSQTGAMRK VATYFAEALA RRIYRIFPPD SLDPSYNDKL 240 QIPFYETCPY LKFAHFTANQ AILEAFSMAS RVHVIDFGLK QGMQWPALMQ ALALRPGGPP 300 AFRLTGIGPP QPDNTDALQQ VGWKLAQLAE RIGIEFEFRG FVANSLADLE PEMLDIRPPE 360 IEVVAVNAVF ELHPLLARPG GIEKVVSSIK AMKPKIVTVV EQEANHNGPV FLDRFTEALH 420 YYSTLFDSLE GSGVAPASQD LAMSELYLGR QICNVVACEG MDRVERHEPL TQWRTRMETA 480 GFSPVHLGSN AYKQASMLLA LFASGDGYRV EENNGCLMLG WHTRPLIATS AWRLAGTESG 540 SELTQELS
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Probably acts by participating in large multiprotein complexes that represses transcription of GA-inducible genes. Upon GA application, it is degraded by the proteasome, allowing the GA signaling pathway (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AY208992 | 0.0 | AY208992.1 Gossypium hirsutum GIA/RGA-like gibberellin response modulator (GAI) mRNA, GAI-Dwarf8 allele, complete cds. |