PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Gh_D07G0317 | ||||||||
Common Name | WRKY51 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | WRKY | ||||||||
Protein Properties | Length: 305aa MW: 33674 Da PI: 8.1401 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 97 | 1.2e-30 | 157 | 215 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK+ k+++ pr+Y++C++a +Cpvkkkv+rsaedp+v++ tYegeHnh Gh_D07G0317 157 RDGYQWRKYGQKVTKDNPSPRAYFKCSFApSCPVKKKVQRSAEDPSVLVATYEGEHNHA 215 7***************************99****************************6 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 27.187 | 151 | 217 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 9.6E-30 | 151 | 217 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 7.59E-26 | 153 | 217 | IPR003657 | WRKY domain |
SMART | SM00774 | 3.0E-35 | 156 | 216 | IPR003657 | WRKY domain |
Pfam | PF03106 | 3.7E-25 | 158 | 214 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0002237 | Biological Process | response to molecule of bacterial origin | ||||
GO:0002238 | Biological Process | response to molecule of fungal origin | ||||
GO:0009409 | Biological Process | response to cold | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0009611 | Biological Process | response to wounding | ||||
GO:0009623 | Biological Process | response to parasitic fungus | ||||
GO:0009651 | Biological Process | response to salt stress | ||||
GO:0009685 | Biological Process | gibberellin metabolic process | ||||
GO:0009723 | Biological Process | response to ethylene | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0009751 | Biological Process | response to salicylic acid | ||||
GO:0009753 | Biological Process | response to jasmonic acid | ||||
GO:0009938 | Biological Process | negative regulation of gibberellic acid mediated signaling pathway | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0031347 | Biological Process | regulation of defense response | ||||
GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:1990841 | Molecular Function | promoter-specific chromatin binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 305 aa Download sequence Send to blast |
MGSSAWVDTT LDLNINPFHH RNKALRTKSE GEMADSDVKL PFKQEQNADL VEELNRIKAE 60 NKKLTEMLTA LGHCYNDLQN KFTELVTINS ENEVSTSKKR KAECEDYSTN MIGFSNGNKE 120 TSCSDEDSCK VPRECIKTTI SRIYVRTNPS DNSLIVRDGY QWRKYGQKVT KDNPSPRAYF 180 KCSFAPSCPV KKKVQRSAED PSVLVATYEG EHNHARPSPS EVAILSPKCS AKPVSCASTR 240 PSAPTATLEL MQPEGYGDGA KKKIQEVDDA PAAIQQVLVQ HMAASLTRNP NFTAALAAAI 300 SGRVI |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wj2_A | 2e-21 | 155 | 218 | 16 | 78 | Probable WRKY transcription factor 4 |
2lex_A | 2e-21 | 155 | 218 | 16 | 78 | Probable WRKY transcription factor 4 |
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Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Ghi.6651 | 0.0 | leaf |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KF031094 | 0.0 | KF031094.1 Gossypium hirsutum WRKY transcription factor 51 (WRKY51) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016744622.1 | 0.0 | PREDICTED: WRKY transcription factor 18-like isoform X1 | ||||
TrEMBL | A0A1U8P085 | 0.0 | A0A1U8P085_GOSHI; WRKY transcription factor 18-like isoform X1 | ||||
STRING | Gorai.001G037700.1 | 0.0 | (Gossypium raimondii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM2477 | 28 | 72 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31800.1 | 9e-82 | WRKY DNA-binding protein 18 |