PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Gh_A11G1811 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | WRKY | ||||||||
Protein Properties | Length: 113aa MW: 12672.9 Da PI: 4.4228 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 33.7 | 7.5e-11 | 76 | 102 | 1 | 27 |
---SS-EEEEEEE--TT-SS-EEEEEE CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrC 27 +dDgy+WrKYG+K+vk+s++p + rC Gh_A11G1811 76 VDDGYKWRKYGKKSVKNSPNPSYFPRC 102 59*******************877799 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 2.9E-10 | 69 | 103 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 3.53E-10 | 70 | 104 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 12.645 | 71 | 102 | IPR003657 | WRKY domain |
SMART | SM00774 | 0.0098 | 76 | 111 | IPR003657 | WRKY domain |
Pfam | PF03106 | 4.9E-7 | 77 | 103 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 113 aa Download sequence Send to blast |
MDFSPNGHSN PKPNSIFFPE NPDPMADFEI SDYLILDAGV FEDDTSEKGM GVANESETSG 60 ASATPEHSNM QKIEAVDDGY KWRKYGKKSV KNSPNPSYFP RCWNFKPLDS FNI |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012492284.1 | 7e-46 | PREDICTED: probable WRKY transcription factor 51 isoform X2 | ||||
TrEMBL | A0A0D2TKU2 | 2e-44 | A0A0D2TKU2_GOSRA; Uncharacterized protein | ||||
STRING | Gorai.007G245200.1 | 3e-45 | (Gossypium raimondii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM5711 | 27 | 47 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G26170.1 | 7e-10 | WRKY DNA-binding protein 50 |