PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_A09G1986
Organism
Gossypium hirsutum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family ERF
Protein Properties Length: 113aa    MW: 12057.2 Da    PI: 9.8021
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_A09G1986genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.24.9e-191970155
          AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 ++y+GVr ++ +g + AeIrdp++  + +r++lg+f taeeAa+a+++a+ +++g
  Gh_A09G1986 19 TRYRGVRARP-WGTFGAEIRDPNQ--QGARVWLGTFNTAEEAARAYDRAAYAMRG 70
                 68********.**********944..44*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.8E-131970IPR001471AP2/ERF domain
CDDcd000181.03E-161979No hitNo description
PROSITE profilePS5103223.0642078IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.8E-312080IPR001471AP2/ERF domain
SMARTSM003805.7E-322084IPR001471AP2/ERF domain
SuperFamilySSF541711.63E-222080IPR016177DNA-binding domain
PRINTSPR003671.2E-102132IPR001471AP2/ERF domain
PRINTSPR003671.2E-104460IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 113 aa     Download sequence    Send to blast
MEGNHKAKDD KEGSGGGMTR YRGVRARPWG TFGAEIRDPN QQGARVWLGT FNTAEEAARA  60
YDRAAYAMRG QFAILNFPHE YPMGSGGGAA ANATTSAASS SSSSSAMERQ YKS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-331386780Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016733150.17e-78PREDICTED: ethylene-responsive transcription factor 14-like
SwissprotQ9LSX03e-33ERF96_ARATH; Ethylene-responsive transcription factor ERF096
TrEMBLA0A1U8N2762e-76A0A1U8N276_GOSHI; ethylene-responsive transcription factor 14-like
STRINGGorai.006G249900.12e-46(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM3575722
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43410.11e-22ERF family protein
Publications ? help Back to Top
  1. Zander M,Thurow C,Gatz C
    TGA Transcription Factors Activate the Salicylic Acid-Suppressible Branch of the Ethylene-Induced Defense Program by Regulating ORA59 Expression.
    Plant Physiol., 2014. 165(4): p. 1671-1683
    [PMID:24989234]