PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Gh_A08G1750 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | EIL | ||||||||
Protein Properties | Length: 613aa MW: 69551.6 Da PI: 5.4723 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 512.7 | 1.7e-156 | 48 | 420 | 1 | 353 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkek 98 +el++rmw+d+m+lkrlke++k ke ++ +k++ s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipekgkpv+gasd+Lr+WWk+k Gh_A08G1750 48 DELERRMWRDKMRLKRLKEQNKC----KEG-IDIAKQRLSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDK 140 79*****************9996....788.******************************************************************* PP XXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.---- CS EIN3 99 vefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtppyk 196 v+fdrngpaai+kyqa+n i+++++++++ ++h+l+elqDTtlgSLLsalmqhcdppqrrfplekg++pPWWPtG+e+ww++lgl++dqg ppyk Gh_A08G1750 141 VRFDRNGPAAIAKYQADNSIPGKNDGCNS-IGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGIPPPWWPTGNEEWWPQLGLPEDQGSPPYK 237 ***************************88.9******************************************************************* PP -GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX...XXXXXXXXXXXXXXXXXXXX.XXXXX CS EIN3 197 kphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss...slrkqspkvtlsceqkedve.gkkes 290 kphdlkkawkv+vLtavikh+sp+i++ir+l+rqsk+lqdkm+akes ++l+++nqee+++++++++s s+ ++ ++++++ +++dve +++e+ Gh_A08G1750 238 KPHDLKKAWKVGVLTAVIKHISPDIAKIRKLVRQSKCLQDKMTAKESSTWLAIINQEEALARELYPDSCpplSSGGGNVSLVINDCSEYDVEgVEDEP 335 *******************************************************************444456666999*************555555 PP X.XXXXXXXXXX..........................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXX CS EIN3 291 kikhvqavktta..........................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqne 353 + +vq++k ++ +++++rkrk ++ + ++v++k ++tc+ q+++se +l+f+d++++++++ Gh_A08G1750 336 N-FDVQERKPRTissnmvmermraiqqppysikgevvgNLDFTRKRK-PSNDLNMVEQK--IYTCEFLQCPYSEFRLGFHDRTARDNHQ 420 5.99****99999*********************************9.56666666555..6*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 2.9E-129 | 48 | 295 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 6.4E-76 | 168 | 305 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 8.63E-62 | 174 | 298 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 613 aa Download sequence Send to blast |
MMMFDEMGIC GDMDFFSAPL GEKDVAASQI EPEATVEDDY SDEEIDVDEL ERRMWRDKMR 60 LKRLKEQNKC KEGIDIAKQR LSQEQARRKK MSRAQDGILK YMLKMMEVCK AQGFVYGIIP 120 EKGKPVTGAS DNLREWWKDK VRFDRNGPAA IAKYQADNSI PGKNDGCNSI GPTPHTLQEL 180 QDTTLGSLLS ALMQHCDPPQ RRFPLEKGIP PPWWPTGNEE WWPQLGLPED QGSPPYKKPH 240 DLKKAWKVGV LTAVIKHISP DIAKIRKLVR QSKCLQDKMT AKESSTWLAI INQEEALARE 300 LYPDSCPPLS SGGGNVSLVI NDCSEYDVEG VEDEPNFDVQ ERKPRTISSN MVMERMRAIQ 360 QPPYSIKGEV VGNLDFTRKR KPSNDLNMVE QKIYTCEFLQ CPYSEFRLGF HDRTARDNHQ 420 LTCPYRNSSA QFGGSNFSVN EVKPVIFPRQ FGQSKPAAPQ VTSVSTPFDL SGLGVPEDGQ 480 KTIGELMSVY DNNIQGNKNM NPSNNLVTKG QNVLQPKIQH QQDEFFRGQG VMMEGNFFDD 540 SSMLHNQQMF SQGEAQFERF KGLNSPLDSN HNNNGFQLMF GSPFDLASFD YKEDLHAVGM 600 DSMPKQDVSI WFQ |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 1e-83 | 173 | 305 | 2 | 134 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 1e-83 | 173 | 305 | 2 | 134 | Protein ETHYLENE INSENSITIVE 3 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor acting as a positive regulator in the ethylene response pathway. Is required for ethylene responsiveness in adult plant tissues. Binds a primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter with consequence to activate the transcription of this gene. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | HQ525317 | 0.0 | HQ525317.1 Gossypium herbaceum clone NBRI_B2_520 simple sequence repeat marker, mRNA sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016732408.1 | 0.0 | PREDICTED: protein ETHYLENE INSENSITIVE 3-like | ||||
Swissprot | O24606 | 0.0 | EIN3_ARATH; Protein ETHYLENE INSENSITIVE 3 | ||||
TrEMBL | A0A1U8N3L9 | 0.0 | A0A1U8N3L9_GOSHI; protein ETHYLENE INSENSITIVE 3-like | ||||
STRING | Gorai.004G227800.1 | 0.0 | (Gossypium raimondii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM2135 | 28 | 79 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20770.1 | 0.0 | EIL family protein |