PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Gh_A08G1191 | ||||||||
Common Name | WRKY26 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | WRKY | ||||||||
Protein Properties | Length: 325aa MW: 35494.2 Da PI: 7.236 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 97.6 | 8.4e-31 | 145 | 203 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC ++k+ver ++dp+++++tY+ eHnh+ Gh_A08G1191 145 SDVWAWRKYGQKPIKGSPYPRGYYRCSSSkGCLARKQVERHRSDPNMFIVTYTAEHNHP 203 79*************************998****************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 34.578 | 139 | 205 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 1.3E-30 | 140 | 205 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.96E-26 | 141 | 205 | IPR003657 | WRKY domain |
SMART | SM00774 | 2.1E-37 | 144 | 204 | IPR003657 | WRKY domain |
Pfam | PF03106 | 9.7E-26 | 146 | 203 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 325 aa Download sequence Send to blast |
MDVDWDLHAV VRGCATVTTT TSSSGGGCGG VAANSSLMAD LYPQSRFSSF GSQEEPFQGQ 60 FSCFPNQFEA KNAMEELHKL YKPFFPKSQP QTKQQQEHQQ VKPKLSQVGS VTTTSSSTST 120 NNSRSKRRKN QLKRVCHVPP EGLSSDVWAW RKYGQKPIKG SPYPRGYYRC SSSKGCLARK 180 QVERHRSDPN MFIVTYTAEH NHPAPTHRNS LAGSTRQKPF TPQTVTAGDS VKPSSSKPAD 240 SLSPTTSVDE GVVVQSTKVH SREDLVEDEG EDEFGMSDTA VSDDFFEGLE GLAEIVTGNC 300 FPENFPASFD FSWTANNAAT AAGGI |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5w3x_B | 7e-22 | 129 | 206 | 2 | 80 | Disease resistance protein RRS1 |
5w3x_D | 7e-22 | 129 | 206 | 2 | 80 | Disease resistance protein RRS1 |
Search in ModeBase |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Ghi.10332 | 0.0 | leaf| ovule| stem |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor involved in the expression of defense genes in innate immune response of plants. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Activates WRKY 29, SIRK and its own promoters. {ECO:0000269|PubMed:11875555}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced after flagellin treatment. {ECO:0000269|PubMed:11875555}. |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KJ825871 | 0.0 | KJ825871.1 Gossypium hirsutum WRKY protein 29 (WRKY29) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001313821.1 | 0.0 | WRKY transcription factor 22-like | ||||
Swissprot | O04609 | 2e-92 | WRK22_ARATH; WRKY transcription factor 22 | ||||
TrEMBL | A0A2P5S5H6 | 0.0 | A0A2P5S5H6_GOSBA; Uncharacterized protein | ||||
STRING | Gorai.004G160100.1 | 0.0 | (Gossypium raimondii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM7810 | 27 | 41 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01250.1 | 2e-72 | WRKY family protein |