PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_A07G0261
Common NameWRKY11
Organism
Gossypium hirsutum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family WRKY
Protein Properties Length: 305aa    MW: 33651.9 Da    PI: 7.1143
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_A07G0261genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.82.9e-30157215259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  +Dgy+WrKYGqK+ k+++ pr+Y++C++a +Cpvkkkv+rsaedp++++ tYegeHnh 
  Gh_A07G0261 157 RDGYQWRKYGQKVTKDNPSPRAYFKCSFApSCPVKKKVQRSAEDPSFLVATYEGEHNHA 215
                  7***************************99****************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.4E-29149217IPR003657WRKY domain
PROSITE profilePS5081126.968151217IPR003657WRKY domain
SuperFamilySSF1182909.15E-26153217IPR003657WRKY domain
SMARTSM007742.5E-34156216IPR003657WRKY domain
PfamPF031068.5E-25158214IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MGSSAWVDTT LDLNINPFHH RNKALRTESE GEMADSDVKL PFKQEQNAVL VEELNRIKAE  60
NKKLTEMLTV LGHCYNDLQN KFMELVTINS ENEVSTSKKR KAECEDYSPN MIGFSNGNTE  120
TSCSDEDSCK MPRECIKTTI SRTYVRTNPS DNSLIVRDGY QWRKYGQKVT KDNPSPRAYF  180
KCSFAPSCPV KKKVQRSAED PSFLVATYEG EHNHAHPSPS EVAILSPKCS AKPVSCASTR  240
PSAPTATLEL MQPGGYGDGA EKKTQEVDDA PAAIQQVLVQ HMAASLTRNP NFTAALAAAI  300
SGRVI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A5e-211552181678Probable WRKY transcription factor 4
2lex_A5e-211552181678Probable WRKY transcription factor 4
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ghi.66510.0leaf
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF6698320.0KF669832.1 Gossypium hirsutum WRKY transcription factor 11 (WRKY11) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017644113.10.0PREDICTED: WRKY transcription factor 18-like
TrEMBLA0A2P5X4I20.0A0A2P5X4I2_GOSBA; Uncharacterized protein
STRINGGorai.001G037700.10.0(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM24772872
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31800.18e-81WRKY DNA-binding protein 18
Publications ? help Back to Top
  1. Dou L, et al.
    Genome-wide analysis of the WRKY gene family in cotton.
    Mol. Genet. Genomics, 2014. 289(6): p. 1103-21
    [PMID:24942461]