PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Gh_A06G2115 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | WRKY | ||||||||
Protein Properties | Length: 137aa MW: 15734.5 Da PI: 6.7795 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 32.6 | 1.6e-10 | 116 | 137 | 1 | 22 |
---SS-EEEEEEE--TT-SS-E CS WRKY 1 ldDgynWrKYGqKevkgsefpr 22 +dDgy+WrKYG+K+vk++++pr Gh_A06G2115 116 MDDGYRWRKYGKKKVKNNPNPR 137 69*******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.7E-11 | 104 | 137 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 5.23E-9 | 108 | 137 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 14.16 | 111 | 137 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.7E-6 | 117 | 137 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 137 aa Download sequence Send to blast |
MFNSIILTPP NNPENSTPIC TPTLEITSHT HHLHLDDHFL VDPEQYNCKE TTTFTSSHMK 60 TSAYGSCWEV PGCNSFAYQY MQPNYDDKGS ANTADINGDD LRLKIAFRTK SDIEIMDDGY 120 RWRKYGKKKV KNNPNPR |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KF669804 | 0.0 | KF669804.1 Gossypium hirsutum WRKY transcription factor 113 (WRKY113) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017645345.1 | 1e-100 | PREDICTED: probable WRKY transcription factor 50 | ||||
TrEMBL | A0A2P5XD19 | 3e-99 | A0A2P5XD19_GOSBA; Uncharacterized protein | ||||
STRING | Gorai.010G131300.1 | 1e-57 | (Gossypium raimondii) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G26170.1 | 9e-14 | WRKY DNA-binding protein 50 |