PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_A04G0658
Common NameWRKY44
Organism
Gossypium hirsutum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family WRKY
Protein Properties Length: 466aa    MW: 51395.2 Da    PI: 8.9939
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_A04G0658genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY105.23.4e-33194250360
                  -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
         WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                  DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers  d+++ ei+Y+geHnh+k
  Gh_A04G0658 194 DGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSL-DGQIAEIVYKGEHNHPK 250
                  9***************************************.***************85 PP
2WRKY104.74.9e-33384441259
                  --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                   Dg++WrKYGqK+vkg+++prsYYrCt  +C+v+k+ver+++dp+++++tYeg+Hnhe
  Gh_A04G0658 384 GDGFRWRKYGQKVVKGNPYPRSYYRCTNVKCNVRKHVERASDDPRAFITTYEGKHNHE 441
                  6********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.6E-30184251IPR003657WRKY domain
SuperFamilySSF1182902.22E-26190251IPR003657WRKY domain
SMARTSM007741.3E-37192250IPR003657WRKY domain
PROSITE profilePS5081124.076194251IPR003657WRKY domain
PfamPF031066.7E-26194249IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.3E-34368443IPR003657WRKY domain
SuperFamilySSF1182901.31E-28376443IPR003657WRKY domain
PROSITE profilePS5081134.819378443IPR003657WRKY domain
SMARTSM007741.2E-38383442IPR003657WRKY domain
PfamPF031064.1E-26385441IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009957Biological Processepidermal cell fate specification
GO:0010214Biological Processseed coat development
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 466 aa     Download sequence    Send to blast
MEVKEAERIV IAKPVASRPT CSSFKSFSEL LAGAINASPP NACSENIVPA IRPKTVRFKP  60
VVNRAPSAMI SSQAEQSGIG ISISSDKVSK SDVKPTVVYK PQAKLVSKTT VSLLANMGNF  120
SASNQQRLQS KEVPVEYANW EKMRAQVRPN HHQNTPSQAE TDQTSEPSKV GSQNMEEDPK  180
VLPAVANSDR PSYDGYNWRK YGQKQVKGSE YPRSYYKCTH PNCPVKKKVE RSLDGQIAEI  240
VYKGEHNHPK PQPPKRNSSQ GLGFTSDGTG QDANNSLWSN NHNERGEGSE TRAENHSEVG  300
LSVLPAYQVK ALAPYEHVTT CGASENSVGL SGECEEASKE GADVESKSKR RKNENQSSEV  360
GTLGECIQEP RVVVQSCTDS EIMGDGFRWR KYGQKVVKGN PYPRSYYRCT NVKCNVRKHV  420
ERASDDPRAF ITTYEGKHNH EMPLRNTNHV TAASDPDSNS PAIKDK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-31194443877Probable WRKY transcription factor 4
2lex_A1e-31194443877Probable WRKY transcription factor 4
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ghi.211360.0boll| ovule
Expression -- Microarray ? help Back to Top
Source ID E-value
GEO846473200.0
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ8713400.0KJ871340.1 Gossypium hirsutum cultivar lumianyan22 WRKY transcription factor 44 (WRKY44) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016738332.10.0PREDICTED: WRKY transcription factor 44-like
RefseqXP_016738333.10.0PREDICTED: WRKY transcription factor 44-like
TrEMBLA0A1U8NH000.0A0A1U8NH00_GOSHI; WRKY transcription factor 44-like
STRINGGorai.009G421200.10.0(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM83622740
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37260.11e-113WRKY family protein