PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS74556.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family C2H2
Protein Properties Length: 168aa    MW: 17834.1 Da    PI: 10.6416
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS74556.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.69.5e-054567123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                ++C++C++ F ++  L  H++ H
  EPS74556.1 45 FSCNYCSRKFYSSQALGGHQNAH 67
                89******************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576675.09E-74272No hitNo description
PROSITE profilePS5015711.6554572IPR007087Zinc finger, C2H2
PROSITE patternPS0002804767IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    Send to blast
MENSDLALGL TLPSKNEEAE LALFTSPPRP PPAVDQKQSS EKRVFSCNYC SRKFYSSQAL  60
GGHQNAHKRE RTVARRGHAA AAAAAAAGGG FRGFASLPLH GGFNRSLGIQ VHSMIRKPGV  120
VALGKAPAAS QTQSASGGAR FDGGMRFSDG RVRWESGLQE ELDLSLKL
Functional Description ? help Back to Top
Source Description
UniProtActs as negative regulator of abscisic acid (ABA) signaling during germination and early seedling development. Involved in the regulation of vegetative development and fertility. Modulates red light signaling in seedling photomorphogenesis. {ECO:0000269|PubMed:24808098}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Down-regulated by abscisic acid (ABA). {ECO:0000269|PubMed:24808098}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028083388.16e-40zinc finger protein 1-like
SwissprotQ392622e-28ZFP3_ARATH; Zinc finger protein 3
TrEMBLS8DAL81e-118S8DAL8_9LAMI; Uncharacterized protein
STRINGXP_009623268.16e-37(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA58272233
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80730.16e-23zinc-finger protein 1
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]
  3. Joseph MP, et al.
    The Arabidopsis ZINC FINGER PROTEIN3 Interferes with Abscisic Acid and Light Signaling in Seed Germination and Plant Development.
    Plant Physiol., 2014. 165(3): p. 1203-1220
    [PMID:24808098]
  4. Zhang A, et al.
    The Arabidopsis Gene zinc finger protein 3(ZFP3) Is Involved in Salt Stress and Osmotic Stress Response.
    PLoS ONE, 2016. 11(12): p. e0168367
    [PMID:27977750]