PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS74199.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | bHLH | ||||||||
Protein Properties | Length: 163aa MW: 18654.7 Da PI: 7.112 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 14.1 | 8.5e-05 | 2 | 40 | 12 | 55 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 RR ri +a++ Lrel+P++ k + + + +++++k+Lq EPS74199.1 2 RRLRIAHAIDALRELVPHN-----KEVGREAFVDIVIDHVKHLQ 40 99****************8.....44666677777777777776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 9.102 | 1 | 39 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 3.42E-4 | 2 | 42 | No hit | No description |
SuperFamily | SSF47459 | 7.33E-7 | 2 | 50 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.4E-4 | 2 | 49 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 163 aa Download sequence Send to blast |
SRRLRIAHAI DALRELVPHN KEVGREAFVD IVIDHVKHLQ NQMKELCQSR LSGESSSAPV 60 TFIEGHGHYI VQEQMLIGPL EETLGEMFTV YPSAADSLLQ SKGLVVMPMC FADGLCENNE 120 ILIKKKKITY NKLYVVVFRK EWSFFIWGIC NNSIRLSVLE FFN |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011079827.1 | 6e-48 | transcription factor bHLH66-like isoform X5 | ||||
Refseq | XP_020550207.1 | 2e-47 | transcription factor bHLH66-like isoform X4 | ||||
TrEMBL | S8D396 | 1e-118 | S8D396_9LAMI; Uncharacterized protein (Fragment) | ||||
STRING | Migut.D00274.1.p | 2e-41 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA9646 | 16 | 17 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24260.1 | 2e-11 | LJRHL1-like 1 |
Publications ? help Back to Top | |||
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