PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS73454.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | FAR1 | ||||||||
Protein Properties | Length: 248aa MW: 28350.9 Da PI: 7.1993 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 89.6 | 4.4e-28 | 89 | 176 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA+++GF +r+sk ++s+r+g+ + r fvC+keg+r +++++ k r+r+etr+gC+a++ v+k ++gkw+vtk+++eH+H+l+p EPS73454.1 89 FYNSYATRTGFLIRVSKLSRSRRDGSAIGRAFVCNKEGFRIPDRRE--KILRQRTETRVGCRAMILVRKLTSGKWVVTKFVKEHTHPLTP 176 ******************************************9988..999************************************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03101 | 2.1E-25 | 89 | 176 | IPR004330 | FAR1 DNA binding domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence Send to blast |
MDFEIDDDVN GEVVGGSAGF GRIANGDDAF VGSSTDVVLR EELDIKVDDD SSERESFRLD 60 ELQVATYSSA MDEPYMGQEF DSEAAAHAFY NSYATRTGFL IRVSKLSRSR RDGSAIGRAF 120 VCNKEGFRIP DRREKILRQR TETRVGCRAM ILVRKLTSGK WVVTKFVKEH THPLTPGRGR 180 KVMIYDHYPN EQDRIRELSQ QLANEKKKVA TYKRHLETIF KHIEEHNESL GKKIQGIVNC 240 VREIESRE |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011098324.1 | 1e-140 | protein FAR1-RELATED SEQUENCE 5 | ||||
TrEMBL | S8D119 | 0.0 | S8D119_9LAMI; Uncharacterized protein (Fragment) | ||||
STRING | Migut.H01929.1.p | 1e-132 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA11568 | 23 | 25 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G59470.2 | 7e-97 | FAR1 family protein |
Publications ? help Back to Top | |||
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