PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS73086.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | Nin-like | ||||||||
Protein Properties | Length: 185aa MW: 21986.5 Da PI: 8.8447 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 78.8 | 6e-25 | 94 | 144 | 2 | 52 |
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 + +++++dl+ y +lp+++AA++++vc+Tv+K+iCR+ G++RWPhRkiks+ EPS73086.1 94 TRNLKVKDLKDYLDLPMEEAARKMNVCPTVIKKICRKSGVERWPHRKIKSI 144 689**********************************************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 16.108 | 84 | 165 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 2.8E-21 | 96 | 144 | IPR003035 | RWP-RK domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence Send to blast |
PIPCICCQVL REITHFNGLD VKRLEIHGKL GIITHVVVAK FEFDSHQDRQ IIDFSRRGST 60 SVKRFLLQYF HTCEEEGYFL LQDPLSSFYE RERTRNLKVK DLKDYLDLPM EEAARKMNVC 120 PTVIKKICRK SGVERWPHRK IKSIEAKISK KLQKLCSIDE RERESARADI DMYKRELDMI 180 YQEYS |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011088847.1 | 4e-57 | uncharacterized protein LOC105169981 | ||||
TrEMBL | S8D6M1 | 1e-134 | S8D6M1_9LAMI; Uncharacterized protein (Fragment) | ||||
STRING | evm.model.supercontig_126.43 | 4e-47 | (Carica papaya) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3505 | 20 | 27 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38340.1 | 1e-07 | Nin-like family protein |
Publications ? help Back to Top | |||
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