PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS71773.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family WRKY
Protein Properties Length: 71aa    MW: 8140.08 Da    PI: 9.8612
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS71773.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.44.4e-31967260
                --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEE.EEEES--SS-- CS
        WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvve.itYegeHnhek 60
                dDgynWrKYGqK vkgsefprsYY+Ct+++C++kk  ers  d+k+++ + Y+g+H h+k
  EPS71773.1  9 DDGYNWRKYGQKLVKGSEFPRSYYKCTYPNCEAKKIFERSP-DGKITDaVLYKGSHAHPK 67
                8****************************************.888875388*******85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081123.583368IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.2E-26569IPR003657WRKY domain
SuperFamilySSF1182907.06E-26768IPR003657WRKY domain
SMARTSM007749.6E-32867IPR003657WRKY domain
PfamPF031067.2E-24966IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 71 aa     Download sequence    Send to blast
RNGSERSSDD GYNWRKYGQK LVKGSEFPRS YYKCTYPNCE AKKIFERSPD GKITDAVLYK  60
GSHAHPKPQA P
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A7e-179681877Probable WRKY transcription factor 4
2lex_A7e-179681877Probable WRKY transcription factor 4
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016487145.19e-35PREDICTED: probable WRKY transcription factor 20, partial
SwissprotQ93WV06e-30WRK20_ARATH; Probable WRKY transcription factor 20
TrEMBLS8E7D78e-46S8E7D7_9LAMI; Transcription factor (Fragment)
STRINGSolyc07g065260.2.18e-34(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22862460
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.12e-32WRKY family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]