PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS71330.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | FAR1 | ||||||||
Protein Properties | Length: 230aa MW: 26004.3 Da PI: 8.3541 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 75 | 1.5e-23 | 52 | 146 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.....tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 Y++YA+ +GF+vr+ k+++ +++ ++ ++Cskeg ++++ ++ + +++ +r+etrtgCka++ + +++g w+v++++++HnHe+ap EPS71330.1 52 LYCDYAQALGFNVRRGKQYYFMGTKKLRSKIYCCSKEGVKDDKPDSttpasAATASYKRPETRTGCKAMICFSCDDNGLWKVSRFVKDHNHEMAP 146 69***************************************9999977776667777***********************************975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03101 | 5.2E-21 | 52 | 146 | IPR004330 | FAR1 DNA binding domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence Send to blast |
MEGNSDEDGA VHPRSGGEVV DVNSGHDEAH IADSERRLWE QAVYSEEEAY MLYCDYAQAL 60 GFNVRRGKQY YFMGTKKLRS KIYCCSKEGV KDDKPDSTTP ASAATASYKR PETRTGCKAM 120 ICFSCDDNGL WKVSRFVKDH NHEMAPSYGR PLPKSGQAIL AASVHGMQGE GDKIRELSLQ 180 LAVAKRRAER FERQAASYKR QLKSIIHKME EHNDWLSMKI QKVVKGFDQL |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011093603.1 | 1e-112 | uncharacterized protein LOC105173527 isoform X2 | ||||
TrEMBL | S8CWV7 | 1e-173 | S8CWV7_9LAMI; Uncharacterized protein | ||||
STRING | Migut.J01148.1.p | 1e-110 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA14517 | 7 | 9 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G59470.2 | 1e-22 | FAR1 family protein |
Publications ? help Back to Top | |||
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