PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS71319.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family ARR-B
Protein Properties Length: 362aa    MW: 40451.8 Da    PI: 8.0662
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS71319.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like20.88.6e-07201218522
     G2-like   5 rWtpeLHerFveaveqLG 22 
                 +Wt+eLH rF++ave LG
  EPS71319.1 201 EWTQELHLRFMDAVETLG 218
                 7****************7 PP
2Response_reg35.36.1e-13331431105
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH.ESEEEEESSCTTSEHHHHHHHHHHHT......TTSEEEEEESTTTHHHHHHHH CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd.pDlillDiempgmdGlellkeireee......pklpiivvtahgeeedaleal 90 
                   vl+vd ++  +    ++l+  +y +v  ++ ++ a+ +l  +  +D+i+  ++ p+++G++l+++ ++ +      +   + v++a+++ + a +al
    EPS71319.1  33 VLLVDHDREGLIHTGKLLQICQY-KVSIVEYASVAMSMLSSSAkFDVIVANVDSPDLHGFKLVQQAAAVGvpiaerMWNSVAVMSAEEDAAKAMKAL 128
                   79999999999999*********.***************77777*********************998888787667799***************** PP

                   HTTESEEEESS--HH CS
  Response_reg  91 kaGakdflsKpfdpe 105
                   +aGa  f +Kp+ +e
    EPS71319.1 129 EAGAFLFMEKPTTIE 143
                   ***********9887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23001.4E-1730166No hitNo description
SuperFamilySSF521726.4E-1530160IPR011006CheY-like superfamily
SMARTSM004489.5E-631148IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011022.32332153IPR001789Signal transduction response regulator, receiver domain
PfamPF000725.7E-833143IPR001789Signal transduction response regulator, receiver domain
CDDcd001567.89E-934152No hitNo description
SuperFamilySSF466891.79E-6196235IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.3E-4196219IPR009057Homeodomain-like
TIGRFAMsTIGR015571.6E-7200236IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    Send to blast
MWEEAGCFPM DRWGASSASS SPSYRRLVEE IHVLLVDHDR EGLIHTGKLL QICQYKVSIV  60
EYASVAMSML SSSAKFDVIV ANVDSPDLHG FKLVQQAAAV GVPIAERMWN SVAVMSAEED  120
AAKAMKALEA GAFLFMEKPT TIEVVRLLWQ HVVRERARIV RERDVVFLER PAARGKKKFR  180
AAADDLANSS TSNVKKKMCT EWTQELHLRF MDAVETLGEG RLTRMQVASH LQKCRNDNWR  240
SPEERRSQHS DLPPSAVADQ LTKPRRFGSK PATVMSLKTS SSGGGGSRSQ SNSPIGGGVS  300
PANYRNQHSE DIFNLDSLMS ITFQEIKSSP HLPEFVRHPP HFHQQELQRH LSPETSNFES  360
DG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011079700.15e-85two-component response regulator ARR14-like
TrEMBLS8CVC80.0S8CVC8_9LAMI; Uncharacterized protein
STRINGMigut.D00936.1.p4e-49(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8132384
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31920.12e-11response regulator 10
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]