PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS71051.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | bHLH | ||||||||
Protein Properties | Length: 196aa MW: 22374.8 Da PI: 8.3752 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 36.7 | 7.6e-12 | 18 | 63 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h E++RR+ i++ fe Lr+l+P++ +K++ a+i A++YI++L EPS71051.1 18 KHLGPEKQRRELIKDNFEALRKLIPNP-----TKNDRASIMGDAINYINEL 63 66667**********************.....9****************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 4.58E-14 | 12 | 77 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 14.634 | 14 | 63 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.4E-12 | 15 | 80 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.62E-9 | 17 | 65 | No hit | No description |
Pfam | PF00010 | 4.5E-9 | 17 | 63 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.6E-7 | 20 | 69 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009555 | Biological Process | pollen development | ||||
GO:0048658 | Biological Process | anther wall tapetum development | ||||
GO:0052543 | Biological Process | callose deposition in cell wall | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 196 aa Download sequence Send to blast |
VFEFKSGEMD HSDGRNTKHL GPEKQRRELI KDNFEALRKL IPNPTKNDRA SIMGDAINYI 60 NELKKTASEL KALLQKKRSE KERVKRANCE NISLETDPNS CSWLQRKSYN TEVDVRIIMD 120 QVTVKLVHHK RIKCCLVLVS KIFDEFQLDL HDVAGGVIGD HYSFLFNSKI CEGAIVKASS 180 LANKLIEVME EQCAVV |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00285 | DAP | Transfer from AT2G31220 | Download |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By UV treatment. {ECO:0000269|PubMed:12679534}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012831429.1 | 2e-77 | PREDICTED: transcription factor bHLH91-like isoform X1 | ||||
Refseq | XP_012831430.1 | 6e-78 | PREDICTED: transcription factor bHLH91-like isoform X2 | ||||
Swissprot | Q84TK1 | 3e-51 | BH010_ARATH; Transcription factor bHLH10 | ||||
TrEMBL | S8D138 | 1e-143 | S8D138_9LAMI; Uncharacterized protein (Fragment) | ||||
STRING | Migut.N01685.1.p | 7e-77 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2696 | 23 | 51 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31220.1 | 1e-53 | bHLH family protein |
Publications ? help Back to Top | |||
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