PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS70444.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family NAC
Protein Properties Length: 122aa    MW: 14320.5 Da    PI: 9.8969
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS70444.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM100.42.5e-3111221126
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 
                 lppGf+F+Ptdee+v +yL++k+ +++l++  v++++di++++Pwd+p    ++e++ yfF +    +  ++r  + t +g+Wk tg +k ++ + +  
  EPS70444.1   1 LPPGFHFQPTDEEIVFQYLARKTFSRPLPAPVVVHDIDILNMDPWDFPG---HSEQDRYFFNRVTGCS--DDRGIKRTCTGFWKPTGFQKLIVGSgRMP 94 
                 79****************************888***************3...357789**99887654..4566666889*************974455 PP

         NAM  99 lvglkktLvfykgrapkgektdWvmhey 126
                  vg+k+t vfy +r++++++t+W+m+ y
  EPS70444.1  95 MVGIKRTVVFYMERNRRAVRTSWFMNVY 122
                 6************************977 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100535.2421122IPR003441NAC domain
SuperFamilySSF1019412.09E-321122IPR003441NAC domain
PfamPF023652.3E-172122IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 122 aa     Download sequence    Send to blast
LPPGFHFQPT DEEIVFQYLA RKTFSRPLPA PVVVHDIDIL NMDPWDFPGH SEQDRYFFNR  60
VTGCSDDRGI KRTCTGFWKP TGFQKLIVGS GRMPMVGIKR TVVFYMERNR RAVRTSWFMN  120
VY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A8e-22112215138Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011073111.16e-44NAC domain-containing protein 83
TrEMBLS8CT572e-86S8CT57_9LAMI; Uncharacterized protein (Fragment)
STRINGXP_009597132.12e-38(Nicotiana tomentosiformis)
STRINGMigut.D01296.1.p2e-38(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13872377
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.16e-33NAC domain containing protein 83
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]