PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS69898.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | MYB_related | ||||||||
Protein Properties | Length: 163aa MW: 18259.9 Da PI: 4.3954 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.5 | 3e-08 | 1 | 25 | 23 | 48 |
-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqkyl 48 +W++Ia +++ gRt++++k++w+++l EPS69898.1 1 RWAAIACHLP-GRTDNDVKNFWNSHL 25 4*********.************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00249 | 2.2E-6 | 1 | 25 | IPR001005 | SANT/Myb domain |
SuperFamily | SSF46689 | 2.28E-6 | 1 | 31 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 14.596 | 1 | 29 | IPR017930 | Myb domain |
CDD | cd00167 | 7.92E-6 | 1 | 25 | No hit | No description |
Gene3D | G3DSA:1.10.10.60 | 1.1E-10 | 1 | 25 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 163 aa Download sequence Send to blast |
RWAAIACHLP GRTDNDVKNF WNSHLMKRVG IEQSSSSPPT SNSVHHQWEP PVSKPSGGGD 60 YFMRLWNSEV GESFRNINDF ESDGVCHSPC SQTSSLTKVE SSWYKPEREM DDGDDEPWSK 120 NDPATCSDAS KSHCEMDDSS AMLKLLLEFP AGENDMGFLQ DDL |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011076175.1 | 5e-42 | transcription factor MYB3-like | ||||
TrEMBL | S8E2M7 | 1e-118 | S8E2M7_9LAMI; Uncharacterized protein (Fragment) | ||||
STRING | Migut.F01122.1.p | 2e-30 | (Erythranthe guttata) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61250.1 | 6e-22 | myb domain protein 17 |
Publications ? help Back to Top | |||
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