PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS69830.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 126aa MW: 15220 Da PI: 5.8597 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 66 | 5.1e-21 | 31 | 84 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t+eq++ Le+ Fe+++++ e++ eLAk lgL+ rqV +WFqNrRa++k EPS69830.1 31 KKRRLTAEQVHLLERSFEEDNKLEPERKSELAKGLGLQPRQVAIWFQNRRARWK 84 5678*************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 129.2 | 1.7e-41 | 30 | 120 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekkrrl++eqv+lLE+sFee++kLeperK+ela+ Lglqprqva+WFqnrRAR+k+kqlEkdy+ Lk++y +l ++ e++ ++ +L++e+ EPS69830.1 30 EKKRRLTAEQVHLLERSFEEDNKLEPERKSELAKGLGLQPRQVAIWFQNRRARWKAKQLEKDYDDLKSSYHSLLSDYESILLQNGKLKSEI 120 69*************************************************************************************9987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50071 | 17.848 | 26 | 86 | IPR001356 | Homeobox domain |
SMART | SM00389 | 2.8E-19 | 29 | 90 | IPR001356 | Homeobox domain |
SuperFamily | SSF46689 | 2.35E-20 | 31 | 97 | IPR009057 | Homeodomain-like |
Pfam | PF00046 | 2.9E-18 | 31 | 84 | IPR001356 | Homeobox domain |
CDD | cd00086 | 1.41E-14 | 31 | 87 | No hit | No description |
Gene3D | G3DSA:1.10.10.60 | 1.4E-22 | 32 | 93 | IPR009057 | Homeodomain-like |
PRINTS | PR00031 | 9.4E-7 | 57 | 66 | IPR000047 | Helix-turn-helix motif |
PROSITE pattern | PS00027 | 0 | 61 | 84 | IPR017970 | Homeobox, conserved site |
PRINTS | PR00031 | 9.4E-7 | 66 | 82 | IPR000047 | Helix-turn-helix motif |
Pfam | PF02183 | 9.3E-14 | 86 | 126 | IPR003106 | Leucine zipper, homeobox-associated |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0001558 | Biological Process | regulation of cell growth | ||||
GO:0009637 | Biological Process | response to blue light | ||||
GO:0009651 | Biological Process | response to salt stress | ||||
GO:0009965 | Biological Process | leaf morphogenesis | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0042803 | Molecular Function | protein homodimerization activity | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 126 aa Download sequence Send to blast |
DDSTKKRPFF TVASEDYYYD DEYFDDQLPE KKRRLTAEQV HLLERSFEED NKLEPERKSE 60 LAKGLGLQPR QVAIWFQNRR ARWKAKQLEK DYDDLKSSYH SLLSDYESIL LQNGKLKSEI 120 VWLREK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 78 | 86 | RRARWKAKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription activator involved in leaf development. Binds to the DNA sequence 5'-CAAT[AT]ATTG-3'. {ECO:0000269|PubMed:8535134}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00323 | DAP | Transfer from AT3G01470 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012849408.1 | 3e-57 | PREDICTED: homeobox-leucine zipper protein HAT5 | ||||
Refseq | XP_015573608.1 | 1e-57 | homeobox-leucine zipper protein HAT5 | ||||
Refseq | XP_015967037.1 | 2e-57 | homeobox-leucine zipper protein HAT5 | ||||
Refseq | XP_016203259.1 | 4e-57 | homeobox-leucine zipper protein HAT5 | ||||
Refseq | XP_025701506.1 | 4e-57 | homeobox-leucine zipper protein HAT5 | ||||
Refseq | XP_025701507.1 | 4e-57 | homeobox-leucine zipper protein HAT5 | ||||
Swissprot | Q02283 | 4e-50 | HAT5_ARATH; Homeobox-leucine zipper protein HAT5 | ||||
TrEMBL | S8CSP0 | 3e-85 | S8CSP0_9LAMI; Uncharacterized protein (Fragment) | ||||
STRING | XP_002517348.1 | 4e-57 | (Ricinus communis) | ||||
STRING | Migut.H00128.1.p | 1e-56 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA7891 | 23 | 30 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01470.1 | 4e-52 | homeobox 1 |
Publications ? help Back to Top | |||
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