PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS68099.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | Trihelix | ||||||||
Protein Properties | Length: 207aa MW: 23977.9 Da PI: 6.6037 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 78.8 | 8e-25 | 34 | 131 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrt.sessstcpyfdqle 86 +Wt+++v++Li+a+++++e+ ++ +kk++W++vsk+++ergf +sp+qC++k+++lnkryk+++e+ +++t +e++++ +++d ++ EPS68099.1 34 KWTDRMVRLLITAVSYINEETPPENvamlrrkhsnlQKKGKWKSVSKVLAERGFFVSPQQCEDKFNDLNKRYKRLNEILGRGTcCEVVENPSLLDLMD 131 7**************999888876666677777888**********************************************7689999999999987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13837 | 7.1E-22 | 32 | 157 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 207 aa Download sequence Send to blast |
KGKSSSDKDD SSFADEIPVT VKGKKLSSTW HRVKWTDRMV RLLITAVSYI NEETPPENVA 60 MLRRKHSNLQ KKGKWKSVSK VLAERGFFVS PQQCEDKFND LNKRYKRLNE ILGRGTCCEV 120 VENPSLLDLM DHVSEKLKDE VKKILSSKHL HYEEMCSYHN GNRLHLPPDP ELQHSLQLAI 180 SSRDDHDENE SKVDQETDMD DDQEESR |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022874487.1 | 1e-100 | uncharacterized protein LOC111393267 isoform X2 | ||||
TrEMBL | S8CLQ9 | 1e-151 | S8CLQ9_9LAMI; Uncharacterized protein (Fragment) | ||||
STRING | XP_009590352.1 | 4e-97 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA7600 | 18 | 30 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21200.1 | 3e-79 | sequence-specific DNA binding transcription factors |
Publications ? help Back to Top | |||
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