PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS66755.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | ARR-B | ||||||||
Protein Properties | Length: 186aa MW: 20774.3 Da PI: 10.3822 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 82.6 | 4.4e-26 | 126 | 179 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kp+l+W++ LH+rF+ea++ L G e+A+Pk+ile+m+v+gLt+e+v+SHLQkYR+ EPS66755.1 126 KPKLVWNNSLHNRFLEALRIL-GLERAVPKKILEVMNVPGLTRENVASHLQKYRI 179 79*******************.********************************6 PP | |||||||
2 | Response_reg | 39.8 | 2.4e-14 | 4 | 66 | 28 | 90 |
EESSHHHHHHHHHHHHESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHH CS Response_reg 28 eaddgeealellkekdpDlillDiempgmdGlellkeireeepklpiivvtahgeeedaleal 90 +++++ +al +++ + Dl++ D+ mp+m+G++l ++i++e ++lp+i+++a+++ ++ +++ EPS66755.1 4 TVTNPNDALCTIRINGGDLVISDVYMPDMNGYQLQQKIAQEFSNLPVILMSAESNLDTSSRVI 66 688999999999999****************************************99987765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50110 | 17.457 | 1 | 83 | IPR001789 | Signal transduction response regulator, receiver domain |
CDD | cd00156 | 4.20E-16 | 3 | 80 | No hit | No description |
Gene3D | G3DSA:3.40.50.2300 | 1.3E-14 | 3 | 84 | No hit | No description |
SuperFamily | SSF52172 | 2.99E-16 | 3 | 83 | IPR011006 | CheY-like superfamily |
Pfam | PF00072 | 3.5E-11 | 4 | 66 | IPR001789 | Signal transduction response regulator, receiver domain |
Gene3D | G3DSA:1.10.10.60 | 6.9E-26 | 124 | 183 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 9.86E-19 | 124 | 183 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.1E-24 | 126 | 179 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 1.2E-5 | 130 | 178 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0000160 | Biological Process | phosphorelay signal transduction system | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence Send to blast |
AAITVTNPND ALCTIRINGG DLVISDVYMP DMNGYQLQQK IAQEFSNLPV ILMSAESNLD 60 TSSRVICKPI KPEDLKGMLK SGVEADADEV VNQKKKKYNK KKGLKSKSNP NKGCEGKVVK 120 VSSTKKPKLV WNNSLHNRFL EALRILGLER AVPKKILEVM NVPGLTRENV ASHLQKYRIF 180 LRRVTD |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1irz_A | 8e-23 | 122 | 185 | 1 | 64 | ARR10-B |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011076492.2 | 3e-57 | two-component response regulator ARR10-like | ||||
TrEMBL | S8CJ47 | 1e-133 | S8CJ47_9LAMI; Uncharacterized protein (Fragment) | ||||
STRING | Migut.F01146.1.p | 3e-52 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3290 | 20 | 38 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G58080.1 | 1e-23 | response regulator 18 |
Publications ? help Back to Top | |||
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