PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS66715.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | bHLH | ||||||||
Protein Properties | Length: 153aa MW: 17275.7 Da PI: 7.9511 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 19.9 | 1.3e-06 | 58 | 93 | 15 | 55 |
HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++ ++ L++llP++ +K++ a++Le A eYI+ Lq EPS66715.1 58 KLSDKTRSLQKLLPWD-----EKMDIATVLESAYEYIRFLQ 93 67778889*******9.....8******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 8.505 | 43 | 92 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 2.02E-6 | 47 | 97 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 9.1E-10 | 57 | 100 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 3.66E-8 | 57 | 101 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 153 aa Download sequence Send to blast |
DDAYLNGAFA DVSFRSLLTY CSPPNPVYQT IPPDSHFPAK MMPYHHQKRR KLLPPQQKLS 60 DKTRSLQKLL PWDEKMDIAT VLESAYEYIR FLQAQVRALQ SMPSLACSSS PASYGTTILG 120 NLNQQQLLQV MINSESAQSH LYSTGCCVYS IDQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012830415.1 | 2e-39 | PREDICTED: transcription factor bHLH117 | ||||
TrEMBL | S8CJ04 | 1e-110 | S8CJ04_9LAMI; Uncharacterized protein (Fragment) | ||||
STRING | XP_010109560.1 | 2e-32 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA11250 | 18 | 21 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G22100.1 | 2e-19 | bHLH family protein |
Publications ? help Back to Top | |||
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