PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS66403.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | bHLH | ||||||||
Protein Properties | Length: 244aa MW: 27347.3 Da PI: 5.2618 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 31 | 4.7e-10 | 9 | 58 | 1 | 54 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r++ + rE+ RR r+N+ f eL + l ++ +K++Ka+iL +++ Ik+L EPS66403.1 9 RKVQKADREKLRRGRLNEQFMELGKALDPD----RPKNDKASILIDTIQMIKEL 58 5677889********************997....79****************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 1.96E-14 | 5 | 77 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 7.76E-7 | 6 | 62 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 5.7E-12 | 6 | 79 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 12.976 | 8 | 58 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 6.1E-8 | 9 | 58 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 2.5E-7 | 14 | 64 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF12316 | 5.4E-5 | 118 | 234 | IPR024580 | Dishevelled C-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence Send to blast |
MDGETKDSRK VQKADREKLR RGRLNEQFME LGKALDPDRP KNDKASILID TIQMIKELTS 60 QVDKLKSEYA SLTEESRELI HEKNDLREEK ASLKSDVENL NSQYSQRVRS MYPWTGMDQT 120 VLMPLPIPIP SGPVPLQPYP YFGSQNPPPN PYTPYMARDS VVEQLSRYSS SGRDGESGLE 180 KNDDSNDVTT DLELKTPGSN SDQNDNSPLK RRREKRDNDP SSSSGCCSSS SVRSISSITI 240 GGGK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 208 | 215 | LKRRREKR |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011092862.1 | 1e-100 | transcription factor bHLH121 | ||||
Swissprot | Q9LT23 | 5e-72 | BH121_ARATH; Transcription factor bHLH121 | ||||
TrEMBL | S8DTC9 | 1e-176 | S8DTC9_9LAMI; Uncharacterized protein (Fragment) | ||||
STRING | Solyc01g111130.2.1 | 4e-88 | (Solanum lycopersicum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5456 | 24 | 34 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19860.1 | 3e-70 | bHLH family protein |
Publications ? help Back to Top | |||
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