PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS63024.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bZIP
Protein Properties Length: 287aa    MW: 31079.8 Da    PI: 7.2488
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS63024.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_172.37.1e-23194256163
                 XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                 e+e kr++rkq+NRe+ArrsR+RK+ae+e+L++kv++L++eN+aL++el++ ++e++kl++e+
  EPS63024.1 194 EREMKRQKRKQSNRESARRSRLRKQAECERLQQKVETLTNENRALRDELQRVTEECDKLEAEN 256
                 799********************************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.9E-18193253No hitNo description
PfamPF001702.9E-21194256IPR004827Basic-leucine zipper domain
SMARTSM003382.0E-20194258IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.967196259IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.0E-11197253No hitNo description
CDDcd147021.70E-20199250No hitNo description
PROSITE patternPS000360201216IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    Send to blast
PSIPLWHLME LLYHFRLCIL LVEPMFILIL LCPVAAAQGT SESEAKSADG NERARKKSKR  60
ASGSDSKNAA AAASGSGNDV ATQSAESGSE GSSDGSEDDN GKGYCVAAKK GSFDQMLADG  120
QELKCAIAQS NGVPNNYRGA AGVAVPATNP NIGMDIWRSS SAGSGASKLH QTPPGVSPAV  180
CEYRIKSIFF FLDEREMKRQ KRKQSNRESA RRSRLRKQAE CERLQQKVET LTNENRALRD  240
ELQRVTEECD KLEAENDTIK EELSGFCGPE MLLSKLGRSS SPSMTGE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1210216RRSRLRK
2210217RRSRLRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011097214.11e-78G-box-binding factor 1-like isoform X1
RefseqXP_011097215.14e-79G-box-binding factor 1-like isoform X2
TrEMBLS8C8520.0S8C852_9LAMI; Uncharacterized protein (Fragment)
STRINGXP_010070038.15e-72(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA37802446
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36730.22e-39G-box binding factor 1
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]