PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS61810.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bZIP
Protein Properties Length: 122aa    MW: 13910.8 Da    PI: 10.745
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS61810.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_142.91e-133997563
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                ++ +r+q+NRe+ArrsR RK++ ++ L+  ++ L++ N +   ++   ++++ ++++e+
  EPS61810.1 39 RKRKRMQSNRESARRSRMRKQKHLDDLTAQIAHLQKDNGQILTNITVTTQNYLSVEAEN 97
                6789***********************************99999999888888887776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.6E-183599IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.5E-1136119No hitNo description
PROSITE profilePS5021710.2237100IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.81E-123991No hitNo description
PfamPF001703.0E-103984IPR004827Basic-leucine zipper domain
CDDcd147027.05E-184090No hitNo description
PROSITE patternPS0003604257IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009845Biological Processseed germination
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 122 aa     Download sequence    Send to blast
MINSSLRRRT HLVQSFSVVF LYCGNSGSEG DLQGVMDQRK RKRMQSNRES ARRSRMRKQK  60
HLDDLTAQIA HLQKDNGQIL TNITVTTQNY LSVEAENSVL RARMAELTQS LDYLNGVLAS  120
LN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13859RKRKRMQSNRESARRSRMRKQK
25158RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00239DAPTransfer from AT1G75390Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017634928.19e-50PREDICTED: bZIP transcription factor 11-like
SwissprotC0Z2L51e-35BZP44_ARATH; bZIP transcription factor 44
TrEMBLS8C4J63e-83S8C4J6_9LAMI; Uncharacterized protein (Fragment)
STRINGGorai.010G008000.13e-53(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA53724123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.16e-38basic leucine-zipper 44
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  3. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]