PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS59032.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | SRS | ||||||||
Protein Properties | Length: 102aa MW: 10972.1 Da PI: 10.4116 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 117.3 | 2.1e-36 | 12 | 96 | 2 | 82 |
DUF702 2 rsgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa....aeaaskrkrelkskk 82 +sg++sC dCGnqakkdCah+RCRtCCksrgf+C+thvkstWvpaakrrerq+q++++s ++++++ a+a+skr++++++++ EPS59032.1 12 GSGGISCLDCGNQAKKDCAHMRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQHQQQQSSCNTNHRSetppAAANSKRQKREETTA 96 57899**********************************************8888777666665554566555555555443222 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05142 | 2.0E-32 | 15 | 96 | IPR007818 | Protein of unknown function DUF702 |
TIGRFAMs | TIGR01623 | 1.3E-27 | 17 | 59 | IPR006510 | Zinc finger, lateral root primordium type 1 |
Sequence ? help Back to Top |
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Protein Sequence Length: 102 aa Download sequence Send to blast |
GSRGFAGGSG GGSGGISCLD CGNQAKKDCA HMRCRTCCKS RGFQCQTHVK STWVPAAKRR 60 ERQHQQQQSS CNTNHRSETP PAAANSKRQK REETTAAANF TS |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator involved in the transcriptional regulation of terpene biosynthesis in glandular trichomes (PubMed:24884371, PubMed:24142382). Binds to the promoter of the linalool synthase TPS5 and promotes TPS5 gene transactivation (PubMed:24884371, PubMed:24142382). Acts synergistically with MYC1 in the transactivation of TPS5 (PubMed:24884371). {ECO:0000269|PubMed:24142382, ECO:0000269|PubMed:24884371}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009412816.1 | 3e-30 | PREDICTED: protein SHI RELATED SEQUENCE 1-like | ||||
Swissprot | K4B6C9 | 2e-28 | EOT1_SOLLC; Protein EXPRESSION OF TERPENOIDS 1 | ||||
TrEMBL | S8DHZ7 | 1e-67 | S8DHZ7_9LAMI; Uncharacterized protein (Fragment) | ||||
STRING | GSMUA_Achr1P18650_001 | 3e-29 | (Musa acuminata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA678 | 24 | 110 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75520.1 | 1e-23 | SHI-related sequence 5 |
Publications ? help Back to Top | |||
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