PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS58967.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | WRKY | ||||||||
Protein Properties | Length: 237aa MW: 25917.5 Da PI: 5.0501 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 97.1 | 1.2e-30 | 64 | 121 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers++dp+++++tY+++Hnh+ EPS58967.1 64 DNWSWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRHDPTTLVVTYSSDHNHP 121 99************************998****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 7.2E-32 | 55 | 123 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 32.478 | 57 | 123 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 7.72E-27 | 58 | 123 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.2E-35 | 62 | 122 | IPR003657 | WRKY domain |
Pfam | PF03106 | 5.3E-26 | 64 | 121 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence Send to blast |
DREQEEDSST PTENTAESPL SGDEDAYTPL PKKSRRGANK RVVTVAVEGG DGYRSKGEVY 60 PPPDNWSWRK YGQKPIKGSP YPRGYYRCSS SKGCPARKQV ERSRHDPTTL VVTYSSDHNH 120 PLPAAASAKT QVRPPAKPSS IHHHHPPEEE EEDNSPAAAS AAEEPPPDNG FTELAGDFGW 180 LCGVGPALMD EMTLVPAPAW AAAHADVEVF MPIGEEDKHL FGDLGDLPEY SVVFRRC |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 9e-20 | 64 | 123 | 16 | 74 | WRKY transcription factor 1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012837543.1 | 1e-98 | PREDICTED: probable WRKY transcription factor 69 | ||||
TrEMBL | S8DHX0 | 1e-174 | S8DHX0_9LAMI; Uncharacterized protein (Fragment) | ||||
STRING | Migut.M00241.1.p | 4e-98 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA7468 | 22 | 32 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G29280.1 | 3e-55 | WRKY DNA-binding protein 65 |
Publications ? help Back to Top | |||
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