PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS58188.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bZIP
Protein Properties Length: 174aa    MW: 19282.6 Da    PI: 6.8738
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS58188.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.84.1e-124285447
                XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47
                 ++ +r+++NRe+ArrsR RK++ ++ L+  v+ L++eN +   
  EPS58188.1 42 ERKRKRMESNRESARRSRMRKQKHLDDLTAQVARLQEENGQILT 85
                57889**********************************87665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.0E-1139116No hitNo description
SMARTSM003382.4E-1839103IPR004827Basic-leucine zipper domain
PfamPF001703.4E-104183IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.08241104IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.48E-124394No hitNo description
CDDcd147021.52E-204494No hitNo description
PROSITE patternPS0003604661IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    Send to blast
VIDSSLRRRT HLVQSFSVVF LYCGNSAIRS WGSEGESCKT EERKRKRMES NRESARRSRM  60
RKQKHLDDLT AQVARLQEEN GQILTDVTVV TQSFLNVEAE NSVLRARMGE LTQSLHCLSG  120
ILDSINSIGG GGGGGACNVE ADEFLHDGGA WGFAGNNHHQ HFPIMAAAEM MLDY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14263RKRKRMESNRESARRSRMRKQK
25562RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011083621.12e-44bZIP transcription factor 44
RefseqXP_017634928.12e-44PREDICTED: bZIP transcription factor 11-like
SwissprotC0Z2L58e-33BZP44_ARATH; bZIP transcription factor 44
TrEMBLS8D6931e-126S8D693_9LAMI; Uncharacterized protein (Fragment)
STRINGGorai.010G008000.12e-49(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA53724123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.17e-34basic leucine-zipper 44
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  3. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]