PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS57757.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | WRKY | ||||||||
Protein Properties | Length: 104aa MW: 12053.4 Da PI: 10.7114 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 37.6 | 4.3e-12 | 83 | 104 | 1 | 22 |
---SS-EEEEEEE--TT-SS-E CS WRKY 1 ldDgynWrKYGqKevkgsefpr 22 ldDgy+WrKYGqK vk+s+fpr EPS57757.1 83 LDDGYRWRKYGQKAVKNSPFPR 104 59*******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 6.4E-13 | 68 | 104 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 4.97E-10 | 75 | 104 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 14.206 | 78 | 104 | IPR003657 | WRKY domain |
Pfam | PF03106 | 8.4E-8 | 84 | 104 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 104 aa Download sequence Send to blast |
QTIVSLPSNL PENSEIVHTP ATPNSTSFSS SSTEPQPHDR KKSQTSQDQE EKTKKQLKPK 60 KKNQKRQREP RFAFMTKSDV DHLDDGYRWR KYGQKAVKNS PFPR |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001313969.1 | 3e-34 | probable WRKY transcription factor 48 | ||||
Refseq | XP_002279385.1 | 1e-34 | PREDICTED: probable WRKY transcription factor 48 | ||||
Swissprot | O22900 | 9e-28 | WRK23_ARATH; WRKY transcription factor 23 | ||||
TrEMBL | S8DEE0 | 1e-69 | S8DEE0_9LAMI; Uncharacterized protein (Fragment) | ||||
STRING | VIT_05s0077g00730.t01 | 4e-34 | (Vitis vinifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69310.2 | 7e-18 | WRKY DNA-binding protein 57 |
Publications ? help Back to Top | |||
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