PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cotton_A_32051_BGI-A2_v1.0
Organism
Gossypium arboreum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family SAP
Protein Properties Length: 468aa    MW: 52760.9 Da    PI: 8.4254
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cotton_A_32051_BGI-A2_v1.0genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP6811.6e-2074146822455
                         SAP  22 gdassgesegpsssrqraanevwpePflealatqvaidasrslGrlaaasalanvfqvcstwravsrsdllwqrltrriWrrt 104
                                 g ++ g++++ps +r+ra ne+wp Pf+e l +qvaidasrs+Grla a alanvfqvcstw+avsrsd lw+rlt  iW rt
  Cotton_A_32051_BGI-A2_v1.0  41 GRRGVGDFGAPSLTRRRANNEIWPGPFVEDLVVQVAIDASRSFGRLAVAAALANVFQVCSTWQAVSRSDPLWHRLTTVIWGRT 123
                                 3344599**************************************************************************** PP

                         SAP 105 kllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkylaaGfadGavrlfdletrlhvstfl 187
                                 + +++ Wreey+yrh+ta+nfr +r+ y tl+fdpa+vd+   +d l+Crcl+lsd++la+GfadG+vrlfdl+tr+ v tf+
  Cotton_A_32051_BGI-A2_v1.0 124 HCMHASWREEYVYRHQTAQNFRAGRSFYHTLHFDPASVDN---PDGLTCRCLTLSDTHLACGFADGTVRLFDLSTRQLVGTFY 203
                                 ************************************8887...689************************************* PP

                         SAP 188 pqhrdrlGrfsravsGivisdsrlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgrWwvGlyaGvpGrafh 270
                                 p+hrdrlGrfsravsGivi+d r++fatldGdihva+idg  +  ar+a+lG+vvndGalvdf+G+grWwvGlyaGvpGra+h
  Cotton_A_32051_BGI-A2_v1.0 204 PHHRDRLGRFSRAVSGIVITDPRIIFATLDGDIHVAIIDG--EPLARTAHLGNVVNDGALVDFTGCGRWWVGLYAGVPGRALH 284
                                 ****************************************..6799************************************* PP

                         SAP 271 iWdaeteelvfvGGsltdPeavmGWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeerrGlivssldas 353
                                 +Wd++teel +v   ltdPeav+GW++ltel+e++Grvrvt++e+avaCtslr +v+dlrn++  l+++e rrGl v+sld++
  Cotton_A_32051_BGI-A2_v1.0 285 VWDGNTEELAYVNTNLTDPEAVRGWYTLTELIETIGRVRVTGQESAVACTSLRYMVVDLRNPEFPLHDREWRRGLTVTSLDTN 367
                                 *********************************************************************************** PP

                         SAP 354 neayvvvdsrGvatvrrvenleevcrfrvrgaqrgvlgCvnggyalvyaggvlrvWeiekkegylyslrervgevnalvaddr 436
                                 +ea+++vd+rG a+vrrv++leevcrf+ r+ + +v+gC+n+gyal++a+gv+rvWeie+ +  lysl++ v+evna+vaddr
  Cotton_A_32051_BGI-A2_v1.0 368 SEAFIMVDNRGLAIVRRVDTLEEVCRFNTRQGNVNVMGCMNLGYALMCAAGVVRVWEIEHGQ-HLYSLNQNVEEVNAMVADDR 449
                                 *******************************99**************************976.9******************* PP

                         SAP 437 hvavsssdgtihlldfgaq 455
                                 hva++ sd+ ihl+dfgaq
  Cotton_A_32051_BGI-A2_v1.0 450 HVAAAGSDTWIHLWDFGAQ 468
                                 *****************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.1280.502.4E-690163No hitNo description
SuperFamilySSF813839.59E-791139IPR001810F-box domain
SuperFamilySSF509988.63E-19164305IPR011047Quinoprotein alcohol dehydrogenase-like superfamily
Gene3DG3DSA:2.130.10.101.7E-8168292IPR015943WD40/YVTN repeat-like-containing domain
Gene3DG3DSA:2.130.10.106.8E-9339465IPR015943WD40/YVTN repeat-like-containing domain
SuperFamilySSF509988.63E-19352466IPR011047Quinoprotein alcohol dehydrogenase-like superfamily
PROSITE profilePS502949.441418468IPR017986WD40-repeat-containing domain
PROSITE patternPS006780451465IPR019775WD40 repeat, conserved site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 468 aa     Download sequence    Send to blast
MGRQLKFGKQ IRPVRQIEKR TERIGRRKRE TMKKKGLLHR GRRGVGDFGA PSLTRRRANN  60
EIWPGPFVED LVVQVAIDAS RSFGRLAVAA ALANVFQVCS TWQAVSRSDP LWHRLTTVIW  120
GRTHCMHASW REEYVYRHQT AQNFRAGRSF YHTLHFDPAS VDNPDGLTCR CLTLSDTHLA  180
CGFADGTVRL FDLSTRQLVG TFYPHHRDRL GRFSRAVSGI VITDPRIIFA TLDGDIHVAI  240
IDGEPLARTA HLGNVVNDGA LVDFTGCGRW WVGLYAGVPG RALHVWDGNT EELAYVNTNL  300
TDPEAVRGWY TLTELIETIG RVRVTGQESA VACTSLRYMV VDLRNPEFPL HDREWRRGLT  360
VTSLDTNSEA FIMVDNRGLA IVRRVDTLEE VCRFNTRQGN VNVMGCMNLG YALMCAAGVV  420
RVWEIEHGQH LYSLNQNVEE VNAMVADDRH VAAAGSDTWI HLWDFGAQ
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in the specification of floral identity. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in the external flower organs in association with APETALA2 and other repressors. Is required to maintain floral meristem identity in concert with AGAMOUS. Interacts also with APETALA2 to ensure the normal development of ovule.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017632814.10.0PREDICTED: transcriptional regulator STERILE APETALA-like
SwissprotQ9FKH11e-177SAP_ARATH; Transcriptional regulator STERILE APETALA
TrEMBLA0A1U8I2930.0A0A1U8I293_GOSHI; transcriptional regulator STERILE APETALA-like
STRINGGorai.001G221400.10.0(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM110182634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.11e-179SAP family protein
Publications ? help Back to Top
  1. Li N, et al.
    STERILE APETALA modulates the stability of a repressor protein complex to control organ size in Arabidopsis thaliana.
    PLoS Genet., 2018. 14(2): p. e1007218
    [PMID:29401459]