PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cotton_A_20550_BGI-A2_v1.0
Common NameF383_27555
Organism
Gossypium arboreum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 689aa    MW: 75169.4 Da    PI: 8.5874
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cotton_A_20550_BGI-A2_v1.0genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.36e-12185247163
                                 XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                      bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                                 e+e kr  r+ +NRe+A+ sRqRKk ++eeLe+kv ++ +  ++L +++     e a+l++++
  Cotton_A_20550_BGI-A2_v1.0 185 EEEEKRKARLLRNRESAQLSRQRKKHYVEELEDKVRTMHSTITDLNNKIAFFMAENATLRQQL 247
                                 6899******************************************99999999999988875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF001705.4E-11185247IPR004827Basic-leucine zipper domain
SMARTSM003383.9E-17185249IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.3187250IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.0E-17189248No hitNo description
SuperFamilySSF579595.7E-12189247No hitNo description
CDDcd147041.77E-20190241No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0042538Biological Processhyperosmotic salinity response
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005783Cellular Componentendoplasmic reticulum
GO:0016021Cellular Componentintegral component of membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 689 aa     Download sequence    Send to blast
MAEAPLEPQM GSELESLAIP PMDSLYLSSD LGFPLDENDD FQLTFDDFDD LYFPSDSDHL  60
IMPDSSDAPA FTSESYVERY LNSSSPGLDS FSCPNSSGNS HSPISSLGSG NCGSAASDDT  120
NVTSPDSGNN MDQKIDVEEL GKRRVSKRQK GNEETDSIKC RRSSSLLTAN NYNFNSDNKS  180
NSLSEEEEKR KARLLRNRES AQLSRQRKKH YVEELEDKVR TMHSTITDLN NKIAFFMAEN  240
ATLRQQLSTG GAGGGGAGMC PPQPVPLPMY PPVAYPWMPC GPPYMMKPPG SQVPLIPIPR  300
LKTQQQSRPA SKAKKNESKT KKVASVSVLG MLFFILMFSG LVPIMNLRYD NTPVGSGPGF  360
VGDGFYEVHR GRVLRVDSHL NRSKYSRDAA FSYGGFNISN RVHGRRSESG GERKKTGAQS  420
APDYIKNVSE PLTASLYVPR NDKLVKIDGN LIIHSVLASE KALASHKASE RKNKETGLAI  480
PKNFSPALAI PNARENGGKH SREYRNPAER PMALSSGSAD ALKDHIRSTA ADGKMQQWFR  540
EGVAGPMLSS GMCTEVFQFD ASAPGAIVPA SSVTPESAKN RQNATQLNKG RNRRILHGHP  600
VPLSRSDLNI TQEHVGRNSG NQNFQGNKTA SSMVVSVLID PREAGDGDMD DMIVPKSLSR  660
IFVVVLLDSV KYVTYSCGLP RSGLHLVTA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1580593RQNATQLNKGRNRR
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator involved in salt and osmotic stress responses. Functions as a stress sensor and transducer in a signaling pathway that resembles an ER stress response. Following salt stress, BZIP17 is cleaved by SBT6.1 (S1P) and S2P at the C-terminus and the N-terminal bZIP component is translocated to the nucleus, where it activates the expression of salt stress response genes (PubMed:17662035). Functions as a stress sensor and transducer in ER stress signaling pathway. ER stress induces proteolysis of BZIP17 by SBT6.1 (S1P) and S2P, and the N-terminal bZIP component is translocated to the nucleus, where it activates the expression and production of ER chaperones, as well as protein involved in brassinosteroid (BR) signaling, which is required for stress acclimation and growth (PubMed:20876872). {ECO:0000269|PubMed:17662035, ECO:0000269|PubMed:20876872}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017619860.10.0PREDICTED: bZIP transcription factor 17
SwissprotO222080.0BZP17_ARATH; bZIP transcription factor 17
TrEMBLA0A0B0MUW00.0A0A0B0MUW0_GOSAR; TGACG-sequence-specific DNA-binding TGA-1B
STRINGGorai.013G000800.10.0(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM88812737
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40950.11e-144bZIP family protein
Publications ? help Back to Top
  1. Zhou SF, et al.
    Membrane-associated transcription factor peptidase, site-2 protease, antagonizes ABA signaling in Arabidopsis.
    New Phytol., 2015. 208(1): p. 188-97
    [PMID:25919792]
  2. Sagor GH, et al.
    The polyamine spermine induces the unfolded protein response via the MAPK cascade in Arabidopsis.
    Front Plant Sci, 2015. 6: p. 687
    [PMID:26442007]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  4. Kim JS,Yamaguchi-Shinozaki K,Shinozaki K
    ER-Anchored Transcription Factors bZIP17 and bZIP28 Regulate Root Elongation.
    Plant Physiol., 2018. 176(3): p. 2221-2230
    [PMID:29367234]
  5. Cifuentes-Esquivel N, et al.
    bZIP17 regulates the expression of genes related to seed storage and germination, reducing seed susceptibility to osmotic stress.
    J. Cell. Biochem., 2018. 119(8): p. 6857-6868
    [PMID:29693271]
  6. Guan P, et al.
    SENSITIVE TO SALT1, An Endoplasmic Reticulum-Localized Chaperone, Positively Regulates Salt Resistance.
    Plant Physiol., 2018. 178(3): p. 1390-1405
    [PMID:30287478]