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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cotton_A_07779_BGI-A2_v1.0 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
bZIP |
Protein Properties |
Length: 483aa MW: 54366.4 Da PI: 7.7486 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cotton_A_07779_BGI-A2_v1.0 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 34.2 | 5.7e-11 | 191 | 226 | 5 | 40 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLea 40
k rr+++NReAAr+sR+RKka++++Le L++
Cotton_A_07779_BGI-A2_v1.0 191 KTLRRLAQNREAARKSRLRKKAYVQQLESSRIRLTQ 226
7789***********************985555544 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 483 aa
Download sequence Send
to blast |
MATSRGNYMN HSIQLQHHQQ NNHHQQQQQQ HHQHQIQEHN QPHLNQIPYA MMQSSSSSSI 60 PGNFISNKDS GAYDLGELDQ ALFLYLDGQD TSTVQDQRNN SGMRPPTLNI FPSQPMHVEP 120 PSSTKTNTGL VSPATSGSKR PSESSMELAN ARNDTLSSAP HLPVKAVKRE GNRKGPTSSS 180 EQEGPKTPDP KTLRRLAQNR EAARKSRLRK KAYVQQLESS RIRLTQLEQE LQRARTQGMF 240 FGGGNILGGD QGLPVGINNI SPDAALFDME YTRWLEEHHR LMCELRAAVQ EHLPENELRI 300 FVDNCLAHLD QVMNLKSMVA KTDVFHLVSG MWKTPAERCF MWMGGFRPSD LIKVILNQIE 360 PLTEQQIMGI CALQQSTQEA EEALTQGLEA LNQSVSDIIT SDSLSCPPNM ANYMGQMAVA 420 INKLSTIEGF VRQADNLRHQ AILRLHQILT IRQAARCLLA IAEYFHRLRA LSSLWLARPR 480 EDQ
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Functional Description ? help
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Source |
Description |
UniProt | Transcription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | JX583330 | 8e-54 | JX583330.1 Gossypium hirsutum clone NBRI_GE16346 microsatellite sequence. |