PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cotton_A_03700_BGI-A2_v1.0 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | SAP | ||||||||
Protein Properties | Length: 89aa MW: 9485.41 Da PI: 4.923 | ||||||||
Description | SAP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SAP | 71.2 | 1.6e-22 | 4 | 73 | 13 | 82 |
SAP 13 eegseggeggdassgesegpsssrqraanevwpePflealatqvaidasrslGrlaaasalanvfqvcst 82 ++++ +g+gg + g+segps +r+ + ne+w Pfle l qvaidasrs+Grlaaa alanvfqvc + Cotton_A_03700_BGI-A2_v1.0 4 SSADGNGNGGARRCGDSEGPSLTRRCTNNEIWQGPFLEDLVLQVAIDASRSSGRLAAAVALANVFQVCLS 73 22233345555667999***************************************************65 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 89 aa Download sequence Send to blast |
MSSSSADGNG NGGARRCGDS EGPSLTRRCT NNEIWQGPFL EDLVLQVAID ASRSSGRLAA 60 AVALANVFQV CLSSSSYSSF WFDSSKREF |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022771668.1 | 2e-25 | transcriptional regulator STERILE APETALA-like | ||||
TrEMBL | A0A2P5Y5W3 | 6e-36 | A0A2P5Y5W3_GOSBA; Uncharacterized protein | ||||
STRING | Gorai.001G191800.1 | 9e-20 | (Gossypium raimondii) | ||||
STRING | evm.model.supercontig_211.21 | 2e-21 | (Carica papaya) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM24056 | 4 | 4 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G35770.1 | 2e-07 | SAP family protein |