PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_rscf00004448.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family VOZ
Protein Properties Length: 392aa    MW: 43481.7 Da    PI: 5.2899
Description VOZ family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_rscf00004448.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1VOZ444.51.2e-1361163321217
                             VOZ   1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipe 79 
                                     pppsaflgpkcalwdc+rpaqg +w+qdycssfha+lalneg+pg++pvlrp+gi+lkdgllfaal+ak+qgk+vgipe
  FANhyb_rscf00004448.1.g00001.1 116 PPPSAFLGPKCALWDCPRPAQGLDWCQDYCSSFHAALALNEGPPGMAPVLRPGGIGLKDGLLFAALRAKAQGKDVGIPE 194
                                     89***************************************************************************** PP

                             VOZ  80 cegaatakspwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymd 158
                                     cegaatakspwna+elfdl +lege +rewlffdkprrafesgnrkqrslpdy+grgwhesrkqvm+efgglkrsyymd
  FANhyb_rscf00004448.1.g00001.1 195 CEGAATAKSPWNAPELFDLFVLEGEMLREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMNEFGGLKRSYYMD 273
                                     ******************************************************************************* PP

                             VOZ 159 pqpsssfewhlyeyeineldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217
                                     pqp++ fewhlyeyein++da+alyrlelklvd+kk++kgk+s+ds+adlqk++grl+a
  FANhyb_rscf00004448.1.g00001.1 274 PQPLNLFEWHLYEYEINKCDACALYRLELKLVDGKKNSKGKLSNDSVADLQKQMGRLSA 332
                                     *********************************************************97 PP
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009408Biological Processresponse to heat
GO:0009414Biological Processresponse to water deprivation
GO:0009631Biological Processcold acclimation
GO:0009816Biological Processdefense response to bacterium, incompatible interaction
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0048578Biological Processpositive regulation of long-day photoperiodism, flowering
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 392 aa     Download sequence    Send to blast
LCEEEDDASS PLAAPKPEPN DQKLDTGESL VFQEGFSVNH GQQEHSFPMA DQCKSSLLGV  60
RSAGVNNLQG VNQLDYHQLD LRQSFDHNYY TCFNGTALSV EDDLSHATSY LPSICPPPSA  120
FLGPKCALWD CPRPAQGLDW CQDYCSSFHA ALALNEGPPG MAPVLRPGGI GLKDGLLFAA  180
LRAKAQGKDV GIPECEGAAT AKSPWNAPEL FDLFVLEGEM LREWLFFDKP RRAFESGNRK  240
QRSLPDYNGR GWHESRKQVM NEFGGLKRSY YMDPQPLNLF EWHLYEYEIN KCDACALYRL  300
ELKLVDGKKN SKGKLSNDSV ADLQKQMGRL SAEFPSDNKR NVKGRAKVNA KVGVGTVYYT  360
PSQGTATNGT FDYGTGPPYD YLVDNLSGYY LT
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004293908.20.0PREDICTED: transcription factor VOZ1 isoform X1
SwissprotQ9SGQ00.0VOZ1_ARATH; Transcription factor VOZ1
TrEMBLA0A2P6Q4C30.0A0A2P6Q4C3_ROSCH; Putative transcription factor VOZ family
STRINGXP_004293908.10.0(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14983494
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28520.20.0vascular plant one zinc finger protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Yasui Y,Kohchi T
    VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis.
    Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5
    [PMID:25351333]
  3. Kumar S,Choudhary P,Gupta M,Nath U
    VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition.
    Plant Physiol., 2018. 176(4): p. 2917-2930
    [PMID:29507119]
  4. Song C,Lee J,Kim T,Hong JC,Lim CO
    VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis.
    Planta, 2018. 247(6): p. 1439-1448
    [PMID:29536220]