PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_rscf00001500.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family bZIP
Protein Properties Length: 505aa    MW: 56807.8 Da    PI: 6.61
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_rscf00001500.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.51.9e-10235272744
                                     HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                          bZIP_1   7 errkqkNReAArrsRqRKkaeieeLeekvkeLeaeNka 44 
                                      rr+++NReAAr+sR+RKka++++Le    +L++  ++
  FANhyb_rscf00001500.1.g00001.1 235 LRRLAQNREAARKSRLRKKAYVQQLESSRIKLTQLEQE 272
                                     69************************876666655554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.0E-6228301IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.737231275IPR004827Basic-leucine zipper domain
CDDcd147084.72E-23233285No hitNo description
PfamPF001701.5E-7234273IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.38E-7235276No hitNo description
Gene3DG3DSA:1.20.5.1707.4E-8236276No hitNo description
PROSITE patternPS000360236251IPR004827Basic-leucine zipper domain
PfamPF141442.0E-32323397IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 505 aa     Download sequence    Send to blast
MGFSRAFEET EERAGEQYRL ETKLASFMAF SLQGNQLDPQ QQQQQQEHHH QSHHQIQNHH  60
HHQQQQQQHH HEIQYATMQP SSSNIPSVNF IGSSKDSGAY DLGELDQALF LYLDGQQQDH  120
HHHQAPHHVQ DQRHQTSSGM RPPTLNIFPS QPMHVEPSST KGVSTAGIVS SATSGSKRPS  180
EPSMELANPR KIDAAAPSGP PEPAKTIKRE GNCKGPTTSS SEQEGPKTPD PKQTLRRLAQ  240
NREAARKSRL RKKAYVQQLE SSRIKLTQLE QELQRARTQG TFFGGGLVGA EQGVPVGINN  300
ISSDAAVFDI EYARWLEEHH RLMCELRAAV QEHLPENELR LFVDNCLAHY DEVMNLKSMV  360
AKTDVFHIVS GMWKTPAERC FMWMGGFRPS EVIKILLTQI EPLTEQLMAI YSLQQSTSEA  420
EDALTQGLEA LNQSLSDTIA SDSLSMPPNM ANYMGQMALA MNKLSTLEGF VRQVRILSLT  480
VCSFYLQSQI MLLDYARDEL RMTVT
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAPTransfer from AT5G06839Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004309443.10.0PREDICTED: transcription factor HBP-1b(c38)
SwissprotQ52MZ20.0TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A2P6RDP20.0A0A2P6RDP2_ROSCH; Putative transcription factor bZIP family
STRINGXP_004309443.10.0(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47313455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-159bZIP family protein