PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | FANhyb_rscf00001108.1.g00002.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family | NAC | ||||||||
Protein Properties | Length: 177aa MW: 20500.9 Da PI: 4.7074 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 41.8 | 3.3e-13 | 37 | 105 | 54 | 128 |
NAM 54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykg.rapkgektdWvmheyrl 128 +++ewyf+++r +k+ + t++gy +t d+++++ ++++vg k++L fy g r ++g +t+W +he+++ FANhyb_rscf00001108.1.g00002.1 37 NDNEWYFYTTRTNKN------HYLTRNGYYLTTSMDEQIFR-NNKVVGFKRILRFYLGsRPETGIETEWSVHEFQA 105 678******998864......347889**************.999***********885777899*********85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 17.616 | 1 | 135 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 8.5E-23 | 6 | 135 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.3E-14 | 7 | 104 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence Send to blast |
MAAPPFPGLR FYQPTDDEII RNYLIPKILE ENVDHFNDNE WYFYTTRTNK NHYLTRNGYY 60 LTTSMDEQIF RNNKVVGFKR ILRFYLGSRP ETGIETEWSV HEFQANPGVF PAANLLGSVV 120 QEKLSSLVVC KILRTQEPSV NESEERDRDE GDSSGIDMEE LPSTSKNLKG TKLPQEE |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 4e-12 | 7 | 104 | 17 | 139 | Stress-induced transcription factor NAC1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004306061.1 | 1e-122 | PREDICTED: NAC domain-containing protein 67-like | ||||
TrEMBL | A0A2P6S3Z8 | 7e-38 | A0A2P6S3Z8_ROSCH; Putative transcription factor NAM family | ||||
STRING | XP_004306061.1 | 1e-121 | (Fragaria vesca) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF14452 | 7 | 18 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61430.1 | 5e-17 | NAC domain containing protein 100 |