PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

FANhyb_rscf00001064.1.g00002.1

Organism

Fragaria x ananassa

Taxonomic ID

3747

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria

Family

bZIP

Protein Properties

Length: 146aa MW: 17104.4 Da PI: 7.9262

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
FANhyb_rscf00001064.1.g00002.1	genome	kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	42.9	1.1e-13	66	124	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +r +r+++NRe+ArrsR RKk++i+eL+ +v++L N +L ++l +l + ++ +e+ FANhyb_rscf00001064.1.g00002.1 66 RRLKRLISNRESARRSRMRKKKQIQELKHEVDQLYVANNQLYEKLIRLLEVNQRILQEN 124 689********************************************999998888876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	6.8E-9	62	126	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.473	64	127	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	6.68E-11	66	115	No hit	No description
Gene3D	G3DSA:1.20.5.170	9.4E-11	66	134	No hit	No description
Pfam	PF00170	6.0E-12	66	124	IPR004827	Basic-leucine zipper domain
CDD	cd14702	8.90E-14	67	115	No hit	No description
PROSITE pattern	PS00036	0	69	84	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 146 aa Download sequence Send to blast
MDPNESKTHY HLANQTIPSQ LLPTIPHTQI FPMSHFNDIS PYTYTVSTNT VFDETAAAEQ 60 SLNHERRLKR LISNRESARR SRMRKKKQIQ ELKHEVDQLY VANNQLYEKL IRLLEVNQRI 120 LQENAELKET VSSLQVTFTD LIDVTL

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004301090.1	4e-76	PREDICTED: basic leucine zipper 43
TrEMBL	M5WVR4	1e-51	M5WVR4_PRUPE; Uncharacterized protein
STRING	XP_004301090.1	2e-75	(Fragaria vesca)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF13044	24	30

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60830.1	1e-26	basic leucine-zipper 70