PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

FANhyb_rscf00000382.1.g00007.1

Organism

Fragaria x ananassa

Taxonomic ID

3747

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria

Family

bZIP

Protein Properties

Length: 475aa MW: 51197.4 Da PI: 9.7921

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
FANhyb_rscf00000382.1.g00007.1	genome	kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	51.1	3e-16	353	403	5	55
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++eN++Lkk+ +e+ ++ FANhyb_rscf00000382.1.g00007.1 353 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENQDLKKKQDEMMEL 403 79*****************************************99998876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	2.9E-15	346	401	No hit	No description
SMART	SM00338	5.1E-13	349	413	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.392	351	402	IPR004827	Basic-leucine zipper domain
CDD	cd14707	5.88E-26	353	407	No hit	No description
Pfam	PF00170	2.8E-14	353	403	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	5.69E-11	353	402	No hit	No description
PROSITE pattern	PS00036	0	356	371	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009414	Biological Process	response to water deprivation
GO:0009651	Biological Process	response to salt stress
GO:0009738	Biological Process	abscisic acid-activated signaling pathway
GO:0010255	Biological Process	glucose mediated signaling pathway
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0000976	Molecular Function	transcription regulatory region sequence-specific DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence Send to blast
MGANVNFKGF MTDFQGDGGG RPPGNSNALA RQTSIYSLTF DELQNTMGGP GKDFGSMNMD 60 ELLKSIWSAE ETQTMVPSGV VTGDQDGFSQ GQLPLQSQGS LTLPRTLSQK TVDEVWRNLS 120 AKEENGGAGR SNAPQRQQTL GEMTLEEFLV RAGVVREDGP GGSGFFGELA RFGNAGGAGF 180 GFQQPDRGSV GVMGSRISEN GNQIGNLNSN LPLNANGVRS SQQQAPQQLQ IFPKQQPVTY 240 STSQMALGPN SQLGSPGMRG GIMGIGEQGI ISNALVQSPV LQGGGGGGMG MVGLGGGNAR 300 VAAVSPANQL SSDGIGNGKS NGTDTSSVSP MPYVFNNGFR GRKGGPVEKV VERRQRRMIK 360 NRESAARSRA RKQAYTMELE AEVAKLKEEN QDLKKKQDEM MELQKNQDIE IQNLQRGGKR 420 RCLRRTQTSP WLNSCFSSGQ YEWVGEGKQN MVREISLIHI IEQYLFTYKL VRQVI

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence Send to blast

MGANVNFKGF MTDFQGDGGG RPPGNSNALA RQTSIYSLTF DELQNTMGGP GKDFGSMNMD  60
ELLKSIWSAE ETQTMVPSGV VTGDQDGFSQ GQLPLQSQGS LTLPRTLSQK TVDEVWRNLS  120
AKEENGGAGR SNAPQRQQTL GEMTLEEFLV RAGVVREDGP GGSGFFGELA RFGNAGGAGF  180
GFQQPDRGSV GVMGSRISEN GNQIGNLNSN LPLNANGVRS SQQQAPQQLQ IFPKQQPVTY  240
STSQMALGPN SQLGSPGMRG GIMGIGEQGI ISNALVQSPV LQGGGGGGMG MVGLGGGNAR  300
VAAVSPANQL SSDGIGNGKS NGTDTSSVSP MPYVFNNGFR GRKGGPVEKV VERRQRRMIK  360
NRESAARSRA RKQAYTMELE AEVAKLKEEN QDLKKKQDEM MELQKNQDIE IQNLQRGGKR  420
RCLRRTQTSP WLNSCFSSGQ YEWVGEGKQN MVREISLIHI IEQYLFTYKL VRQVI

Functional Description ? help Back to Top
Source	Description
UniProt	Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00186	DAP	Transfer from AT1G45249	Download

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269\|PubMed:10636868, ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004291101.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5
Refseq	XP_011458927.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5
Swissprot	Q9M7Q4	1e-118	AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBL	A0A2D1UXF0	0.0	A0A2D1UXF0_ROSHC; ABRE binding factor
TrEMBL	A0A2P6Q0K4	0.0	A0A2P6Q0K4_ROSCH; Putative transcription factor bZIP family
STRING	XP_004291101.1	0.0	(Fragaria vesca)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1962	34	81

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	2e-44	abscisic acid responsive elements-binding factor 2

Publications ? help Back to Top
Gao S, et al. ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant, 2016. 9(9): p. 1272-1285 [PMID:27373216] Seok HY, et al. Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response. Planta, 2017. 245(2): p. 329-341 [PMID:27770200]