PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_rscf00000379.1.g00008.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family bZIP
Protein Properties Length: 1629aa    MW: 183613 Da    PI: 6.4565
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_rscf00000379.1.g00008.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_125.82.2e-0810351078750
                                      HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                          bZIP_1    7 errkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50  
                                       rr   NReA r++R++Kka ++ Lee+vk+L+  N++L  +l+
  FANhyb_rscf00000379.1.g00008.1 1035 RRRPSGNREAVRKYREKKKAHTAYLEEEVKKLQLLNQQLVRKLQ 1078
                                      455566*********************************98886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd147985.65E-1210136No hitNo description
SuperFamilySSF525407.36E-51164400IPR027417P-loop containing nucleoside triphosphate hydrolase
Gene3DG3DSA:3.40.50.3005.5E-12185350IPR027417P-loop containing nucleoside triphosphate hydrolase
PfamPF009316.1E-39191371IPR002182NB-ARC
PRINTSPR003644.5E-14201216No hitNo description
PRINTSPR003644.5E-14274288No hitNo description
PfamPF009311.6E-5380425IPR002182NB-ARC
SuperFamilySSF520584.76E-48485598IPR032675Leucine-rich repeat domain, L domain-like
Gene3DG3DSA:3.80.10.108.3E-20486598IPR032675Leucine-rich repeat domain, L domain-like
PROSITE profilePS514505.101501522IPR001611Leucine-rich repeat
SMARTSM003690.051522545IPR003591Leucine-rich repeat, typical subtype
PROSITE profilePS514507.935524545IPR001611Leucine-rich repeat
SMARTSM0036911569592IPR003591Leucine-rich repeat, typical subtype
PROSITE profilePS514504.809571592IPR001611Leucine-rich repeat
SuperFamilySSF520584.76E-48661887IPR032675Leucine-rich repeat domain, L domain-like
Gene3DG3DSA:3.80.10.101.2E-19668956IPR032675Leucine-rich repeat domain, L domain-like
PRINTSPR003644.5E-14831847No hitNo description
SMARTSM003381.0E-810261096IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.63410341078IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.9E-1110341096No hitNo description
PfamPF077164.7E-1310341086IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.5E-610341079No hitNo description
CDDcd146864.69E-1110341086No hitNo description
Gene3DG3DSA:3.80.10.101.6E-2312191541IPR032675Leucine-rich repeat domain, L domain-like
SuperFamilySSF520583.4E-2512191543IPR032675Leucine-rich repeat domain, L domain-like
PROSITE profilePS514505.15513771398IPR001611Leucine-rich repeat
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
GO:0043531Molecular FunctionADP binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1629 aa     Download sequence    Send to blast
MPIVRALESA SVSILLNKLA TQDVINFFLK WGIDDLLRAK LKRNLLVIHA VLNHAEEKQV  60
QDSSVKAWLE DVRVAAYDAE DILDDITNDA LEPKNRKHEV WISKIKEGID FKIKDIADTL  120
NPFRERVESK MIKIIDILEE LAKQKDILRL REDSGGVKSG FDRPPTTPML GDESHVYGRE  180
FDKEEIITLL NLGESDDEVS IIPIVGMGGI GKTTLAQLVY NDVNVSSQFH LKAWACVSDV  240
FDVQRITKAL VESVTKASCS SDNLELLQEQ LKTWLKNKKF LFVLDDVWNE KYESWDKLRV  300
PFTVGAPGSK ILITTRSKTV ASLMGTVPTY CLEGLSDGDC WLLFEQIVFR NRNLDAYPKL  360
KVIGKEIVDK SGRQQYFTSS KIKINLPSPP EDLKRCFAYC LMFPKDYEYD REMLILLWMA  420
EGFVPEPEGN QLEENTENHN KSTKARHLSY TRGFNDVFQK FEAFSNVDCL RTFLPLDPLQ  480
GFSMGSLTDK VPCDMMPKLR FLRVLSFSGY LIEKLPDSIG SLKQLRYLNL SHCQIEELPE  540
STSSLYNLQT LLLFRCCSLT RLPANMGNLR NLRHLNIEGT KLKSMPLGMG RLINLQILSD  600
FIVGKAMGKG IAEFKDLSHL RGSISILCLH NVDSVRDAIV ARLKDKKHLD DLVLEWSSSS  660
DGSRNEEIET EVLDALQPHE NLKKLTIKYY GGTEFPYWMG DPLFTNMVYL HLYGCAKCTS  720
LPPLGQLPSL KDLKLEAMHG IKHDMEKWEE WSSDERRKEF PSLRVLSIFR CPKLTKFSHG  780
FSSLEKLRIR KCGALTNFSQ NPALGNLEPV DFPSLQLLVL VGCGDLENLP FSLPSLKVLE  840
IDGCGKLAAL PRMVELSTMY LMDSNAELLG WMMGFSSLTS QHLTHIPHVK CLPEGFIQQY  900
DQVGLAHLAS LQRLTISNCP KLVALPDEDD KLPPVLQYLD LKHCRSLMKL PEKMDDGEVE  960
TLDHAVIPKS NSSGNFHTPT SIDTFRTCLH THTCNLPGPD AAHTHTCYHT HTQVLPSEEN  1020
DGDHSKEDLV LKPKRRRPSG NREAVRKYRE KKKAHTAYLE EEVKKLQLLN QQLVRKLQGQ  1080
ASLEAEFLRL RNLLLDFRGK IDSELGAFPF EKQYYKPGVI SKEGDCELQS NVGETGIHCQ  1140
IDLPCFCPPA VGLSLEAGIG ASEKTMASFG GNCQSPVIEC RDHPKVMASA EVQNPHIQET  1200
LVSSAMDNFE YLADDQVGLA HLASLQRLTI SNCLELFALP DEDDKLPPVL QYLDLKHGRS  1260
LMKLLGKFHN LECLAELQIE WCSNIEAFPD VGLPDKLKRL VIRDCGALKT LPQELLCNNN  1320
ILEYLEVHKC PSLVSILDNG NFPSTLTHLK VYYCKTLRSL PEGLMRKDNT TLNDCSNLQA  1380
LPLSLLDLTN LETLEVKSCP LLQCFPKGEL PANIKFVTIS ECENLQSLPE LFHKLKHLQK  1440
LEISSCPSLL SLPKQGLPSS LRDLKVTDCE KLNPMHQWKL HKLSSLDVFI IDLESISEVL  1500
ENLTSLEKLT IRECDKLQSL PETGLPATIS ALTIQNCSLL KHRCGKDKGE DWSKIKNIPL  1560
RHLDAVNTSL AFLINPEVLA RSHPVPVAIA GVLLSVASID QYPRQLMLTN CRGCTYTNLT  1620
FWNQTAASS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j5t_C5e-434177834833Disease resistance RPP13-like protein 4
6j5t_F5e-434177834833Disease resistance RPP13-like protein 4
6j5t_G5e-434177834833Disease resistance RPP13-like protein 4
6j5t_L5e-434177834833Disease resistance RPP13-like protein 4
6j5t_O5e-434177834833Disease resistance RPP13-like protein 4
6j5u_A5e-434177834833Disease resistance RPP13-like protein 4
6j5v_A5e-434177834833Disease resistance RPP13-like protein 4
6j5w_A5e-434177834833Disease resistance RPP13-like protein 4
6j6i_C5e-434177834833Disease resistance RPP13-like protein 4
6j6i_F5e-434177834833Disease resistance RPP13-like protein 4
6j6i_G5e-434177834833Disease resistance RPP13-like protein 4
6j6i_L5e-434177834833Disease resistance RPP13-like protein 4
6j6i_O5e-434177834833Disease resistance RPP13-like protein 4
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011466842.10.0PREDICTED: putative disease resistance RPP13-like protein 1 isoform X1
TrEMBLA0A2P6S8D20.0A0A2P6S8D2_ROSCH; Putative P-loop containing nucleoside triphosphate hydrolase, leucine-rich repeat domain, L
STRINGXP_004305404.10.0(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF733
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16770.13e-23bZIP family protein